Gene Ppro_1751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1751 
SymbolispG 
ID4572577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand+ 
Start bp1882551 
End bp1883597 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content62% 
IMG OID639755799 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_901421 
Protein GI118580171 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00115344 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CAACCAGACA GATACGAATC GGTTCCGTTG CCATCGGAGG GGATGCGCCC 
TGCTCGGTGC AGTCCATGTG CTCCACGGAT ACCCGCGATG TGGCCGCAAC CCTGGCCCAG 
ATCCAGCGGC TGGCAACTGC CGGCTGCGAA ATCATCCGCT GCGCAGTGCC GGACATGGAT 
GCGGCGGTCG CCTTGGGACG CATAAAGCGG GAGAGTCCCA TCCCTGTGGT TGCCGACATC 
CATTTCGATT ACAAGCTGGC CCTGGCCGTG CTGGAAGGGG GCATCGACGC CCTGCGCCTC 
AACCCGGGCA ACATCGGCGA GAAATGGAAG GTGGCCGAGG TGGTCAAGGC GGCGGCGGAG 
CGCCAGGTTC CCATCCGCAT CGGCGTCAAT GCCGGCTCAC TGGAAAAGGA ACTGCTGGCC 
AAGTATGGTC ACCCAACCGC CGAAGCCATG GTGGAGTCGG CCCTGGGGCA TGTGTCAATC 
CTGGAGGAGC TCGGCTACCG GGAGATCAAG ATATCCCTCA AGGCCTCGGA TGTGATGAAG 
ACCGTCAGCG CCTACCGTTT ACTCTCCCGC AAGGTGGACT ACCCCCTGCA CATCGGCATC 
ACCGAGGCGG GGACCATATT CTCCGGAACG GTCAAGTCAT CGGTGGGGCT GGGTATTCTG 
CTGGCTGACG GCATCGGCGA TACCCTGCGG GTCTCCCTCA CCGGCGACGT GCTGGATGAG 
GTCAGGGTGG GGTACGAGAT CTTGAAGAGC CTGGGATTGC GCCAGCGCGG GGTGAATTTC 
GTATCCTGTC CCACCTGTGG CAGGTGTCAG ATCAACCTGG TCAAGGTTGC CGAGGAGGTG 
GAGCGGCGGC TGCAGGGGGT GGACAAGCGT ATCACCGTGG CTGTCATGGG ATGTGTGGTC 
AACGGTCCGG GTGAGGCCCG GGAGGCGGAC GTGGGCATTG CCGGCGGCAA GGGGGAGGGG 
CTCCTCTTCC GTCATGGTGA AATAATCCGC AAGGTCCCCG AGGATCGGCT GGCCGATGCG 
CTGGTGGAAG AGGTGGAAAA TCTGTAA
 
Protein sequence
MKKTTRQIRI GSVAIGGDAP CSVQSMCSTD TRDVAATLAQ IQRLATAGCE IIRCAVPDMD 
AAVALGRIKR ESPIPVVADI HFDYKLALAV LEGGIDALRL NPGNIGEKWK VAEVVKAAAE 
RQVPIRIGVN AGSLEKELLA KYGHPTAEAM VESALGHVSI LEELGYREIK ISLKASDVMK 
TVSAYRLLSR KVDYPLHIGI TEAGTIFSGT VKSSVGLGIL LADGIGDTLR VSLTGDVLDE 
VRVGYEILKS LGLRQRGVNF VSCPTCGRCQ INLVKVAEEV ERRLQGVDKR ITVAVMGCVV 
NGPGEAREAD VGIAGGKGEG LLFRHGEIIR KVPEDRLADA LVEEVENL