| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1699 |
|---|
| Symbol | |
|---|
| ID | 4572435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1825152 |
|---|
| End bp | 1826771 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639755747 |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_901370 |
|---|
| Protein GI | 118580120 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000359421 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATTA TCGTAACGGA TGAAGTTTCC GCCGAAGGCC TGGCCCTGTT GACCCAGGAG
CCGCGCATTC AGCTTGACGT CAAACTGGGG CTGAGCAAGG AACAGCTGCT GGAGATTCTG
GGCGAGTACG ACGTAATCAT CACCCGCAGC GGCACGTCCG TTGACCGGGA TGTGCTGGAT
GCGGGAAAGC GGCTGAAGAT CGTCGCCCGC GCCGGGGTCG GTATCGACAA TGTTGACGTG
GACTACGCCA GCTCCAAGGG GGTCATCGTC ATCAATGCCC CCTTCGGCAA CACCAACAGC
GCGGCCGAGC ACGCCCTGGC CCTACTGATG ACCTTCTGCC GCAAGATCAC CATCGCCAAT
GCCAGCCTGA AGTCGGGCGA GTGGAAGCGG GCACCCTTCA CCGGCTACGA ACTCAGGGGC
AAGGTTGCCG GCGTCATCGG CCTGGGCAAG GTCGGCGGCC GGGTGGCCAC GCGTCTGAAG
GCATTCGAGT GCGAGGTGCT GGCCTGCGAC CCCTACGTGT CGGTGAAACG CGCCCACGAC
CTGGGGGTCA AGCTGGTCTC CCACGACGAG ATCTACAAGA ACTGCGACAT CATCACCCTG
CATATCCCGC TTAACGACGA GACCCGCGAC ATGATCTCCG CCCGGGAATT CGGCCTGATG
AAGAGCGGCG TAATCGTCAT CAACGCGGCC CGCGGCGGCA TCATCAACGA GCAGGCCCTG
CTGGACAACC TCAACTCCGG CAAGGTGCTG GGCGGCGGCG TTGACGTGTG GAGCGAGGAG
CCGCCCAAGT CGGATCTGCT CAGGCAGCTG ATCGGTCACG AACGGCTGGT GGTCACCCCG
CACCTGGGGG CCAATACCCA CGAGGCGCAG ATCAACGTGG CGGTGGACGT TTCCCGGGAG
ATCGTCAACT ATCTGGACGA CCAGCCCATG GAGAGCGCCG TCAACATCCC CCGCTTCGAC
ATGGCCCTGA TGGACCAGAT GCGGCCGTTC CTCAACCTGA TGAACGTCAT CTGCGAGATC
GGCGTGCAGC TCTTGGACAA CAACGTGGAC AAGGTCAGCT TCGGCTATAG CGGCAGCATC
GCCCACTACG ACTGCACCCC CCTGACGGTC ACCGGCCTCT CCTCCCTGCT GAACCGGGTG
GTGGACCAGG ATGTGAACAT GGTCAATGCC ACGCTGATCG CCGACCAGAT GGGGATCGTG
GTGGAGGAGA ACAAGTCCAC CAGCTGCGAC GCCTTCTCCA ATGTGATCAC CCTGATCATC
GAAGGGGGCG GCAAGAAGCG CACCGTCTCC GGAACACTCT TCGAGGGAGC GCCCCGCATC
GTTCGCCTGC GCGACTTCTC CATCGATTTC TCGCCGGAAG AGCACATGCT GCTCTTGCAC
TACATCGACC TCCCCGGCAT GATCGGCAGG ATCGGCACCA TCATGGGCAC GCACGACATC
AACATCGCCT CCATGAACCT GGGGCGCCGC GAGAAGAAGG GCGAGGCCAT GGTCATCCTC
TCCCTGGATT CGGCGGTGCC ATTGCAGGTT GTTGAAGAGA TCAGGACAGC TACGGACGCA
TCGTTCATCA AACCGCTTCA CCTGAAAAGC GTTTCCTGTT CCCGCGGCCG CGGTCTCTAG
|
|---|
| Protein sequence | MRIIVTDEVS AEGLALLTQE PRIQLDVKLG LSKEQLLEIL GEYDVIITRS GTSVDRDVLD
AGKRLKIVAR AGVGIDNVDV DYASSKGVIV INAPFGNTNS AAEHALALLM TFCRKITIAN
ASLKSGEWKR APFTGYELRG KVAGVIGLGK VGGRVATRLK AFECEVLACD PYVSVKRAHD
LGVKLVSHDE IYKNCDIITL HIPLNDETRD MISAREFGLM KSGVIVINAA RGGIINEQAL
LDNLNSGKVL GGGVDVWSEE PPKSDLLRQL IGHERLVVTP HLGANTHEAQ INVAVDVSRE
IVNYLDDQPM ESAVNIPRFD MALMDQMRPF LNLMNVICEI GVQLLDNNVD KVSFGYSGSI
AHYDCTPLTV TGLSSLLNRV VDQDVNMVNA TLIADQMGIV VEENKSTSCD AFSNVITLII
EGGGKKRTVS GTLFEGAPRI VRLRDFSIDF SPEEHMLLLH YIDLPGMIGR IGTIMGTHDI
NIASMNLGRR EKKGEAMVIL SLDSAVPLQV VEEIRTATDA SFIKPLHLKS VSCSRGRGL
|
|---|
| |