Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1695 |
Symbol | tpiA |
ID | 4572430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 1822115 |
End bp | 1822870 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639755742 |
Product | triosephosphate isomerase |
Protein accession | YP_901366 |
Protein GI | 118580116 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00252562 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCACGC CGCTGATCGC AGGAAACTGG AAACTGCACA AGACCATTGC CGAGTCGTTG GCCATGGTGG ATGAACTGAA ACCGCTGGTG GCGGGAAGCA GGGGGGTGGA GATCGTCGTT GCTCCGGTGT TCACCGCCCT GAAAAGCGTT TCGTTCGCTC TGAACGGTAG TGACATCGGG CTTGCCGCCC AGGACTGCTT CTGGGAAGAA CAGGGGGCCT TCACCGGGGA GGTGTCGCCG GCGCAGCTCA GGGATGCGGG GTGCAGTCAT GTGATCATCG GGCATTCCGA GCGCCGCCAG CTCTTCGGCG AGACCGATGA GGGGGTGAAT CGCAAGGCCA GGGCGGCCGT GGCCGTCGGC CTGACCGCCA TCATCTGCGT AGGGGAAACC ATGGAGGAGC GGGAGAGTCG CGCCACCTTC ACCGTGGTGG GCAGGCAGGT TACGGCCGCC CTGGCCGGCT TCTTGTCCCA CGAATTTTCC CGCATCGTCA TCGCCTACGA ACCGGTCTGG GCCATCGGAA CCGGCAAGAC CGCCACGGAC CAGCAGGCCC AGGAGGTTCA CTGCTATATC CGTAACCTGG TCACCATGTC CATCAGCCAG GCGATTGCCG ATTCCCTGCG TATCCTCTAC GGTGGCAGCG TCAAACCGGA CAACATCAGG GGACTCATGG CGCAACCGGA CATAGATGGA GCCCTGATCG GCGGCGCCAG CCTGAAGGCC GCCTCCTTTG CCGAGATGGT GAATTTCCGG GGATGA
|
Protein sequence | MRTPLIAGNW KLHKTIAESL AMVDELKPLV AGSRGVEIVV APVFTALKSV SFALNGSDIG LAAQDCFWEE QGAFTGEVSP AQLRDAGCSH VIIGHSERRQ LFGETDEGVN RKARAAVAVG LTAIICVGET MEERESRATF TVVGRQVTAA LAGFLSHEFS RIVIAYEPVW AIGTGKTATD QQAQEVHCYI RNLVTMSISQ AIADSLRILY GGSVKPDNIR GLMAQPDIDG ALIGGASLKA ASFAEMVNFR G
|
| |