Gene Ppro_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1690 
Symbol 
ID4572425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1816348 
End bp1816968 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID639755737 
Productputative transcriptional regulator 
Protein accessionYP_901361 
Protein GI118580111 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGT CGGCTGTTGT TGAAAGTGTC ATCTTCAGCG CGGACACGCC CCTGTCGCTG 
GACAAACTGT GCGAACTGCT CCCCGAGTAC GAGCGGGGCG CCATCAGGGA TGTACTGCGC
GATCTGGTCT CACTGCATGA GGTGAGGAAC GGGGGCTTTC AGCTGGTCAA CATTGCCGGC
GGATGGCAGT TTCGTACCCC ATCCTCCCTC CAGCAGTATG TGGTTCGCAA CGTCAAGGCA
AAGTCGGCCA AGTTTTCCCA GTCCTCCCTG GAAACCCTGG CCATCGTGGC CTATCGCCAA
CCGGTGACCC GCGCCGAAAT AGAGTACCTG CGCGGCGTGG ATTGCGGCGG CGTGCTGAGA
ACCCTGCTGG AGAGGAAACT GATCCGTATC CTGGGAAAGA AGGACATCCC GGGTCGGCCG
TTGATCTACG GCACCTCCAG GGAATTCCTG GAGGTCTTTG GTCTGAAAGA CCTGAAGAGC
CTTCCCACCC TGAAGGAGAT CCAGGCCCTG GACGATGTTC CCCTGTTTGA GCGGCAGGAG
GAACTGTTGC TGGATGGTGT CGGCGCTGCT TCCACCCTGA CCCAGGTCGC CCTTGACCTG
CAGGGAGAAC CGGAGCAGTG A
 
Protein sequence
MNLSAVVESV IFSADTPLSL DKLCELLPEY ERGAIRDVLR DLVSLHEVRN GGFQLVNIAG 
GWQFRTPSSL QQYVVRNVKA KSAKFSQSSL ETLAIVAYRQ PVTRAEIEYL RGVDCGGVLR
TLLERKLIRI LGKKDIPGRP LIYGTSREFL EVFGLKDLKS LPTLKEIQAL DDVPLFERQE
ELLLDGVGAA STLTQVALDL QGEPEQ