Gene Ppro_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1689 
Symbol 
ID4572424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand+ 
Start bp1815864 
End bp1816301 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content55% 
IMG OID639755736 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_901360 
Protein GI118580110 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.606027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAGG AATTCAAGGA GTTCGCAATC AGGGGGAACG TCATTGACCT GGCAATCGGT 
ATCATCATCG GTGGCGCGTT CGGCAAGATC GTCGACTCTC TGGTCAAGGA CGTGATCATG 
CCGCCGGTCG GCATGATCAT GGGCAAGATG GATTTCGCCT CGCTGTTCCT CAACCTGTCC 
GGAACCGAGT ACGCGACCCT GGCCGAAGCC AAGAAGGCCG GAGCCGCCAC CCTGAATTAT 
GGTATATTCA TCAGCACCAT CGTCGATTTC CTGATTATGG CTTTCGTCGT CTTCCTGATG 
GTCAAGCAGA TCAACCGTAT GAAGAAGGAG GCTCCCGCTC CTGTTGCTGC ATCGGACAGC 
AAGGACTGCC CCTTCTGTCT TTCACCGATT CCGCTGCAGG CGACCCGCTG CCCGCACTGC 
ACGTCAAACC TGAAGTAA
 
Protein sequence
MLKEFKEFAI RGNVIDLAIG IIIGGAFGKI VDSLVKDVIM PPVGMIMGKM DFASLFLNLS 
GTEYATLAEA KKAGAATLNY GIFISTIVDF LIMAFVVFLM VKQINRMKKE APAPVAASDS 
KDCPFCLSPI PLQATRCPHC TSNLK