Gene Ppro_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1671 
Symbol 
ID4572622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1790477 
End bp1791616 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content63% 
IMG OID639755714 
Productextracellular ligand-binding receptor 
Protein accessionYP_901343 
Protein GI118580093 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAG TTGCACTGCT CTGTAGCCTC ATCTGCATCA CACTGCTGAC CGCTTCGGCG 
GCCTTTGCCG CTCCCTCCCT CAAGATCGGC GGCCTGTTTG CCGTGACCGG TCCGGCCGCC
TTCCTGGGGG AACCGGAGCG TAACACCGCC ATGATGGTGG TGTCCGAGAT CAACCGGGCA
GGGGGCATCC GGGGACAAAA GCTTGAGCTC GTTGTCTACG ATACGGCCGG GGATGCCACC
AAGGCGGTGC AGCTGGCCAA CAAGCTGATC AAGAGCGACA GGGTCATGGC CATCATCGGG
CCCAGCACTA CCGGTGAGTC CATGGCGGTC ATACCGGTGG CCGAGCGCGG CAGGGTGCCG
TTGATCTCCT GCGCCGCCGG GATAAAGATC ACCGAACCGC TGAAAAAGTG GGTCTTCAAG
ACGGCGCAGA ACGACAGCCT GGCCGTTATC AGGATCTACG AACATCTCAA GAAACAGAGG
CTGCAGCGGG TGGCGCTGCT CACCGTTTCC GACGGTTTCG GGGCATCGGG CCGCGAACAG
CTCAAGGCCC AGGCAGCCCG CTATGGCATC AGGATCGTCG CCGACGACAC CTACGGCCCC
AAGGACACGG ACATGACCTC CCAGTTGACC AAGATCCGCG GCCTCAAGCC GGATGCCATC
ATCTGCTGGG GCACCAACCC CGGCCCGGCG GTGATCACCA AAAACGCCCG CCAGCTGGGG
ATAAAAACTC CGCTGTTCAT GAGCCATGGC GTTTCCTCCA AGAAGTACAT CCAACTGGCC
GGAAAGGCTG CCGAAGGGGT CAAGCTCCCC TCGGGCAGGG TGATCGTGGC TGACCAGCTT
CCCGCCTCTG ATCCCCAGAA ACGCTCGCTG ATAGCTTTCG TCAAGGGGTA TGAGAGATAC
TACAAGGCCG AGGGTGACCA CTTCGGCGGC CATGCCTGGG ATGCGGTCAT GCTGCTCAAG
GGCGCCTTCG AGCGCGGCGC AACAACCCCG GCGGCGGTCC GCGACCAGCT GGAAAATACG
CGCCAGTTCC ACGGCATCGG CGGCAGCTTC ACCTTTACCT CCCGGGATCA TGCCGGCCTG
GGCAAGGATG CCTTCGTGCT GGTGGAGGTC AGGAAGGGCG ACTGGGCGAT CGTGAAGTAG
 
Protein sequence
MKKVALLCSL ICITLLTASA AFAAPSLKIG GLFAVTGPAA FLGEPERNTA MMVVSEINRA 
GGIRGQKLEL VVYDTAGDAT KAVQLANKLI KSDRVMAIIG PSTTGESMAV IPVAERGRVP
LISCAAGIKI TEPLKKWVFK TAQNDSLAVI RIYEHLKKQR LQRVALLTVS DGFGASGREQ
LKAQAARYGI RIVADDTYGP KDTDMTSQLT KIRGLKPDAI ICWGTNPGPA VITKNARQLG
IKTPLFMSHG VSSKKYIQLA GKAAEGVKLP SGRVIVADQL PASDPQKRSL IAFVKGYERY
YKAEGDHFGG HAWDAVMLLK GAFERGATTP AAVRDQLENT RQFHGIGGSF TFTSRDHAGL
GKDAFVLVEV RKGDWAIVK