| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1658 |
|---|
| Symbol | |
|---|
| ID | 4572298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1776322 |
|---|
| End bp | 1778061 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639755701 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_901330 |
|---|
| Protein GI | 118580080 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000685853 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA TATTGACAAA AGCTAAATGC ATCATATTCC TCTCTCTTAT AGTCCTAATT
GCCTATTATC CGTCTCTGTT TGTTCCACTT AATTCCGTTG ATGATTCCGG TATGTACCTT
CATCTACTCA ATACAGATGC TTTTACATTA GAAGGCATGT TTTTCCCAGG CCACACCGGC
AGTTATTACC GTCCCTTTGT TCTCTTGTCA TTCATGATGG ATAAATACGT CTGGGGGCTT
GAAGAAAGCT TCATGCATCT GGAAAATATA GTATTTCATC TTGCTAATAC ACTACTGCTT
TTTGCCGTTA CGCGAAGGGC ATGTTCGCTT CTGAAACAAA CATCTTTATT CGTCCCGTTT
GCAACGGCGC TTTTCTTTGC TATCCACCCG CTCAATACCG AAGCAGTCAA CTGGATCTCC
GGTCGAACCG ATCTGCTGGC CGGTTTTTTT CTGTTATTGG CAATGTATTC GATGCTAAAA
AATCCATTGA CTTGGCCTTG TTCGTTATTG GCTGCCATCT TTATGCTTAT GGCCTGCCTT
GCGAAAGAAA CTGCTATTTT TTTCCTTCCG GCAGCATTAC TTTTTCCTTT CTATCTTTCT
TCGCACAAGG ATGAAATTGT GCCAGTAAGC ATAATAGTTC GCAGAAACCT GCCTCATTTA
CTTCTATTCA GTGCTGCTGG TTCCGCATAC TTTGTCTTCC GAGCGTTGGC CTTCGCAAAG
GGCGATCAGG GTGTGACTCG CGTCATGACG CATGTTGCCG GAGCCGAAAG CGCCGGGATG
CTGACAAGCC TGCGGTTAGT ATTCAAGTCT ATCGGTTTTT ATGCAAAAAA ATTGCTATTG
CCGTTTCCGC TGAATTTTGG AATAACCCAT ATTTCGGATC TTTATCTTCC GCTGGGAGTG
CTGGTCTTGG CTGGTGTCAT CTGGCTTATG TCCCGACGGA CATTACCCGC CTTTTTTGTG
ATCTGTGCTG GTGCTGTAGG CACCTCGGCT CTCATGATTC CATTGCTTCG CTTGACTTGG
ACGCCGCTGG GCGAACGGTA TATGTATATT CCCTCAGCTT TTTTTTTGAC AGGTTTGATG
TTGACGGTCG GGCGCTGGGA GCAGCAGCAT GTTCGCTTTC GTACAGCATT GGTACTCTTA
GCAAGTTGTC TTTTCGGCAT AGCACTCTAC GGTACAGTAA CTCGAAATTT TCTCTGGCAG
AACAGTTTGG CATTATTTCA GGATACTTTG AAAAAATCTC CTAATTTTAC TCCGGCTCAG
AATGAAATTG CTAATGCATT GTACGCTCAG GGGAGAAAAC AGGAGGCTAC AGTCATCTAT
AAATCTTTCA CTGAGTCGGA AGGTCTTATT AACGCACAGT ATGGTCTTAA AAATAAAGCT
CTTGCGTTTA TGAATGAAGG TAACTTTTCC GAGGCGCGAG ATATATTGAG CCAATTGCTG
GCTAACCCGG GTAAGCATGA AGTCTCTATC TTGTTACAGG TGCTAGAACT CAACAAAATT
CAGGTTGCAG CGGGCAAGGC TACAATTAAA GGTGTGTATG CTGAATCAGT TGAAACCTTA
ACCCGCTTAA TTGCGCTTAC CGGCGATCCA TTTTATTCAT ATCGTTTAGG AATTGTTCAT
ATGCAAATAG GTGAGCGCCA GAAAGCAATA GCGTCATTTA ATGCCGTTGT ACGAACCGCT
GCACCTACTG CGTATTACAG AAAACCGGCT GAAAAGCTGG CTAAAGAACT TGCTATGTGA
|
|---|
| Protein sequence | MNQILTKAKC IIFLSLIVLI AYYPSLFVPL NSVDDSGMYL HLLNTDAFTL EGMFFPGHTG
SYYRPFVLLS FMMDKYVWGL EESFMHLENI VFHLANTLLL FAVTRRACSL LKQTSLFVPF
ATALFFAIHP LNTEAVNWIS GRTDLLAGFF LLLAMYSMLK NPLTWPCSLL AAIFMLMACL
AKETAIFFLP AALLFPFYLS SHKDEIVPVS IIVRRNLPHL LLFSAAGSAY FVFRALAFAK
GDQGVTRVMT HVAGAESAGM LTSLRLVFKS IGFYAKKLLL PFPLNFGITH ISDLYLPLGV
LVLAGVIWLM SRRTLPAFFV ICAGAVGTSA LMIPLLRLTW TPLGERYMYI PSAFFLTGLM
LTVGRWEQQH VRFRTALVLL ASCLFGIALY GTVTRNFLWQ NSLALFQDTL KKSPNFTPAQ
NEIANALYAQ GRKQEATVIY KSFTESEGLI NAQYGLKNKA LAFMNEGNFS EARDILSQLL
ANPGKHEVSI LLQVLELNKI QVAAGKATIK GVYAESVETL TRLIALTGDP FYSYRLGIVH
MQIGERQKAI ASFNAVVRTA APTAYYRKPA EKLAKELAM
|
|---|
| |