Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1656 |
Symbol | |
ID | 4572296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 1775631 |
End bp | 1775855 |
Gene Length | 225 bp |
Protein Length | 74 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639755699 |
Product | pilin domain-containing protein |
Protein accession | YP_901328 |
Protein GI | 118580078 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000269442 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAACA AATTGAGGAA CAGAAAAGGC TTTACCCTGA TCGAGCTGTT GATCGTCGTG GCGATCATCG GCATCCTGGC GGCCATCGCC ATCCCGCAGT TCTCCGCCTA CCGGGCAAAG GCCTACAACT CGGCCGCCAA CTCTGACCTG AAAAACATCA AGACCGGGAT GGAAGCCTTC ATGGCTGACA ACCAGCAGTA TCCTGGCGAC GTTGACTACA GATAA
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Protein sequence | MLNKLRNRKG FTLIELLIVV AIIGILAAIA IPQFSAYRAK AYNSAANSDL KNIKTGMEAF MADNQQYPGD VDYR
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