| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1622 |
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| Symbol | |
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| ID | 4571932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 1737294 |
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| End bp | 1739621 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639755666 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_901295 |
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| Protein GI | 118580045 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0914545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGCC CCCTCCACCG TTGGCCCCTT CTCGAAGCCG CCCCATCCCC CCCCTCTCCT
TCCCTGCATC AATCGCCAGG ACAACGGGCA GGCGCCCTGA TACTCCTTGT GGCCGTCATC
ATGATGATCG CCCTGCCCTG CGCCGCCTCG GCACAGGAGA CTCAGCACAG GCAGGTGCTG
GTGCTGCACT CGTACCACAA GGGCTTCAAA TGGACCGACG ACATCAGCCA GGGCATAGCA
TCCAGCCTGA ACGAACAGGG GATCAAGACC AGGATCCACT ACGAGTATAT GGATACCAAG
CGAGTGTCCG GTCCCCGCTA TACCGGGTTG CTGCGCGAGA CCTACCGCCT GAAATTCAGC
GCCATGAAAT TCCGGGTGAT CATCGCATCG GACAACGACG CCTTCGACTT TCTGCTCTCC
TACCGCGACG ACCTGTTTCC CGGAACGCCG GTGGTATTCT GCGGGGTCAA TGACTTCGAG
CCGTCCCAAT TGCACGGCAC GCGGCTCTTC ACCGGTGTCA ACGAGTCGGC CGACCTGGCA
GCCACCTTCG ACCTGGCCCT GAGACTCCAC CCCTCGGTCA GGAGAATTGT CGTCATCAAC
GACACCACGA CCACCGGTCG CATCATGCAT CGCAAGATCG TATCCCTGAT CCCCTCCCTC
CGCAGACGCG TGGAGCTGAC CTTTCTGGAA GCCGTGACCA TCCCCGAGAT CAGGGAAGAA
TTGGCAAAGC TTGAGAGCGA CAGCCTGGTG TTCTTTACCC TCTTCTTTCA GGACAGCAAA
GGACGGTTTC TGGAGTATGA CGAGGCCATC TCGCTGCTCG CGCCCCTTTG CCCAGTCCCC
ATCTACGGAG TATGGGATTT CTACCTGGGC AACGGCATCG TGGGGGGCAT GCTGACCAGC
GGCTTTTCCC AGGGGAAGGC AGCCGCAAGA ATCGCGGGGC GCATCCTGGA GGGTGAAGCT
CCCCAGCGCA TCCCGGTGGT GATGAAGAGC CCCAACAGCT TCATGTTCGA CTACCAGCAA
CTGTCCAGGT TCCACATTCC CCGATCCGCC CTGCCGAAGG GCAGCATTAT CATCAACAGT
CCCGCCTCCC GCTACTCCGT GCCGCGCAGC GTCTTCTGGG GTGCGGTTGC CGCCCTGGTC
GGTTCGGCCC TGATCATCCT GTTTCTGACC TACAACACCA TACGACGCAT GAGGGCCGAG
GAACGCAGCC GGCGCCTGGC GGCAATCGTC GACTCATCCG ATGACGCAAT CATCGGCAAG
ACGCCGGACG GCGTCATTAC CAGCTGGAAC AGGGGCGCCG CGAACAAGTT CGGCTATGGA
GAGGAAGAGA TGCTCGGCAA GTCAGTCACC CTTCTGGTTC CTCCCGAACA GCGGGACAAC
GTGCTTCGCG TCCACGAGAA GATCCGCCGC GGCGAGCATG TGGAACATTT TGAAACCGTA
CACATGAGAA AGAATGGCGA ACGAATCCAC ATGTCCCTCA CCTTCTCGCC GGTGACCGAC
AGCCAGGGGC GGGTCATCGC CGTCTCCACC ATCGGGCGCG ACATCTCCGA GCGTAAGAGA
GCCGAACAGC TGCTGCTGGA AAACGCTCTG ATCAATAGGG AACTGGAAAT TGCCCAGCAG
ATCCAGCAGT CCTTTCTGCA GGAGTGTCCC CAGGAACTAC CCGGACTGCT CATGGCATGC
CGCTGCGAAC CAGCCGCCAA GGTGGGGGGT GACTACTACG ACCTGTTCAC CCCCCGGGAG
GGGCTGGTGG ATTGCGTCAT CGCCGACATC ACCGGCCACA GCGTCGGTTC GGCCCTGCTG
ATGACAGAAA CCCGCAGCGT CCTCCAGGCC GAGGTAACCC CCGGACGCAC ACCGGGACAA
CTGCTGGCCG AGGTGAACAA CCTGCTGTAC AACGACCTGT CACGTGCGGA GATGCAGTTG
AGTATGTTCT ATGCGCGCAT CGACACGCCC AACCAGAGGC TCTCCTACGC CAACGCGGGA
CACTGCCGTC CGCTCCTGTA CCATTCCCGT GGCAAATCGG TGCAGGAACT TGATGCCGAC
GGCCTGATCC TGGGAATCAG GCGGGGTGTC TGCTTTGAAG AAGCCAGCAT CGAGGTGGAA
GCAGGGGATG TGCTGCTACT GTACACGGAC GGTGTCATTG AAGCGGAACG AGATCGGGGA
GAGTTCTTCG GCAGCGACCG ACTGAGCCGA CTGCTCACGG AGCAGCATGA ACGGCATCCG
CGGGAGATTA TCGATAAAAT CCTGGCCGAG GTGACCCGTT TTACCAGGAC CAGGGTACGA
GCCGATGACA TCGCCCTGTT CGTGGTCACA TTCACCCCGG ATGCCTGA
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| Protein sequence | MPRPLHRWPL LEAAPSPPSP SLHQSPGQRA GALILLVAVI MMIALPCAAS AQETQHRQVL
VLHSYHKGFK WTDDISQGIA SSLNEQGIKT RIHYEYMDTK RVSGPRYTGL LRETYRLKFS
AMKFRVIIAS DNDAFDFLLS YRDDLFPGTP VVFCGVNDFE PSQLHGTRLF TGVNESADLA
ATFDLALRLH PSVRRIVVIN DTTTTGRIMH RKIVSLIPSL RRRVELTFLE AVTIPEIREE
LAKLESDSLV FFTLFFQDSK GRFLEYDEAI SLLAPLCPVP IYGVWDFYLG NGIVGGMLTS
GFSQGKAAAR IAGRILEGEA PQRIPVVMKS PNSFMFDYQQ LSRFHIPRSA LPKGSIIINS
PASRYSVPRS VFWGAVAALV GSALIILFLT YNTIRRMRAE ERSRRLAAIV DSSDDAIIGK
TPDGVITSWN RGAANKFGYG EEEMLGKSVT LLVPPEQRDN VLRVHEKIRR GEHVEHFETV
HMRKNGERIH MSLTFSPVTD SQGRVIAVST IGRDISERKR AEQLLLENAL INRELEIAQQ
IQQSFLQECP QELPGLLMAC RCEPAAKVGG DYYDLFTPRE GLVDCVIADI TGHSVGSALL
MTETRSVLQA EVTPGRTPGQ LLAEVNNLLY NDLSRAEMQL SMFYARIDTP NQRLSYANAG
HCRPLLYHSR GKSVQELDAD GLILGIRRGV CFEEASIEVE AGDVLLLYTD GVIEAERDRG
EFFGSDRLSR LLTEQHERHP REIIDKILAE VTRFTRTRVR ADDIALFVVT FTPDA
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