Gene Ppro_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1613 
Symbol 
ID4571923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1728674 
End bp1729441 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content59% 
IMG OID639755657 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_901286 
Protein GI118580036 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0796216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCA CAGCAGTCAT TCCAGCCCGC TTTGCTTCTG TGCGTTTTCC GGGCAAGGCG 
CTGGCCATCA TCGACGGCAA GCCGATGATC CAACATGTCT ACGAGCGCAC GGCACGGGCT
TCACTGGTGG ACTCGGTCAT TATCGCTACC GATGACGAGC GTATCCAGCA GGCGGTTTCG
GTCTTCGGCG GTGTCTGTCG CATGACCCGC AATGACCACG AAACAGGAAC CGATCGTCTG
GCCGAGGTGG CTGGGACGCT CTCCGCCGAC ATCATCGTCA ATGTCCAGGG GGATGAGCCG
CTGATCGCTC CCGAGATGAT CGACCAGGCT ATCCGCCCGC TCCTTGATGA CCCGTCCCTG
CGCATGGCTA CACTCAAGAG CCGCATCCGC TGCCTGCACG ATTTTTTGAG CCCCAATGTG
GTCAAGGTGG TAACCGACCG GGACGGCAAT GCGCTGTACT TCTCCCGCTC GCCCCTGCCG
TTCTTCCGGG ACAAGTGGCA GGATCTCAAG GACGAGTCAT TCGCCAGCGG GAAGCTGCTC
TGCTACAAGC ATGTGGGGCT GTACGTCTAT CGTCGTGATT TTCTGGTGGA GTTCGCCGCT
ATGGCGCCCA CCTTTCTGGA AACTTCCGAG AAACTGGAGC AGTTGCGAGC GCTGGAAAAC
GGCGCCCGTA TCCGCGTCGT CGAGACTGAG TTTGAATCCA TTGGTGTGGA CACCCCCGAT
GACCTGGTCA AGGCCAGGGA GCGGTTCAGA GCCATTCAGT CCAAGTAA
 
Protein sequence
MNITAVIPAR FASVRFPGKA LAIIDGKPMI QHVYERTARA SLVDSVIIAT DDERIQQAVS 
VFGGVCRMTR NDHETGTDRL AEVAGTLSAD IIVNVQGDEP LIAPEMIDQA IRPLLDDPSL
RMATLKSRIR CLHDFLSPNV VKVVTDRDGN ALYFSRSPLP FFRDKWQDLK DESFASGKLL
CYKHVGLYVY RRDFLVEFAA MAPTFLETSE KLEQLRALEN GARIRVVETE FESIGVDTPD
DLVKARERFR AIQSK