| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1527 |
|---|
| Symbol | |
|---|
| ID | 4572149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1630366 |
|---|
| End bp | 1632303 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639755571 |
|---|
| Product | serine phosphatase |
|---|
| Protein accession | YP_901200 |
|---|
| Protein GI | 118579950 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCG ATAGAAGCAT TGCCTTCAAA CTGATCCTGG TCATCACGCT CTGCACTTCC
CTCATCTTCA CCGTTATTCT GGGCTACAGC TACTACCGCT CCAAGAGTGT CCTGCAGAGA
GAGCTGGAGA ACAACGCCCG CAACCTGGCG CTGTCGTCGG TTAACAGGGT GGAGGCCGTA
CTCGCCTCGG TCACCAGGGT AACCGAGGGG CTGGCCCGTT CCCTGGAGAA CGGCCGTTAC
AGTCACCGGG AGCTTCTCGC CCTGCTTAAG GACACACTGG CGGACAACCC CGAGATCTAC
GGTTCCTGCG CTGCCTTCGA GCCCGACACC CGCGAAAGCA ACGCCCGCCC CTACGCCCCC
TACTTCTTCC GGAGCCGGGG GAAGATCGCC TACAACAACG AGGACTCCTT CCAGTACCTG
CGCCAGGACT GGTACCAGAT CAGCCGGGAG TTGGGCAGAA CGGAATGGAC CGAGCCCTAT
TACGGCGACA ACGGATCAAA CATCCTCATG GCAAGCTGTT CCGTCCCCTT CCACGAGACC
AGTGGCGGCG CCAGGCGTGT CAAGGGGGTG GTGGTTTCCG ACATTTCCCT GGAGTGGCTG
ACCGCCACGG TGGCATCCAT CAAGGTGCTC AAGAGCGGCT ACGCCTTTCT CCTCTCCCGC
AACGGCACCA TCGTCACCCA CCCTTCCCGG GAGATGATCA TGAACGAGAC CGTCTTCTCC
CTGGCCGAGG CACGCAACGA CCCGGGACTG CGGGCCCTGG GGAGGAAGAT GATCAGCGGG
GGCTCCGACT TCATCCCCTA CACAGACCTG TACGGCAGGC GCTGCTGGCT CTACTACGCC
CCGATCCCCT CCGTGGGCTG GACCCTGGCG GTGGTCTTTC CCGAGGCGGA GCTGCTGGCC
CAGGTGAGAA GCCTGAGCCT GACCGGCGCA ATCATGGGTT TGGCCGGCAT CCTGCTTTTG
ACCCTGGCGG TGGTCTTCAT CGCCCGCTCC ATCACGACGC CGCTCCGTTC CCTGGCCGCG
GCGACCCATC AACTGGCGGC GGGGAACTTC GACCTGGAAC TCCCCCTGGT GCGCTCCAAC
GACGAGGTCG GGTTGCTGGC CCATGACTTT CAGGCCATGA AGGAGTCGCT CAAGGACTAC
ATCAGGAATC TGACCGAGAC CACCGCGGCC AAGGAACGCA TCCAGAGCGA GCTCAAGGTG
GCCACCGACA TCCAGGCCAG CCTGTTGCCC CGCATTTTTC CCGCTTTTCC GGAACGCCCC
GAGTTCGATA TCTTCGCATC CATGGATCCG GCAAAGGAAG TCGGCGGTGA CTTCTACGAC
TTCTTCTTCA TCGACGACAC CAATCTCTGC TTCCTGATTG CCGATGTTTC GGACAAGGGT
GTACCGGCTG CACTGTACAT GATGGTGGCC AAGACCCTGC TGAAGTCTGA GGCGCAGCGC
CTGGGCGAGC CGGACAAAAT TCTTTCATCC GTCAACAACA TCCTGGCGGC GGACAATGAC
AGCTGCATGT TCGCCACGGT GTTCTGCGCC ATCCTGGATA CCACCTGCGG TGAGGTGCGC
TTCGCCAATG CCGGACACAA CCCGCCGCTG ACAATCGACT CCACGGGGAT AGGCTACCTC
ACCCTGGAAT CGGGTTTCGT TCTGGGCCCC ATGCCAGATA TTGTCTACAC AACCCAACGA
CTCACCATGC AGCCGGGAGA CACGCTGTTT CTCTATACCG ACGGCGTGAC CGAGGCGAAA
AACCGGAAGG AAGAACTGTA CGGCGAGCCG CAGCTGCTTG ATGCCCTGCG GCGTGGCCCC
AGGGATGATC TTACGGAAAC AATCCATTTC ATCCGTGCCG AAGTCACGCG TCATGCCAAT
GGCGCGCCGC AATCGGACGA CATCACCATG GTTGCGATTA CCTACCGGGG AAGCGGTGTG
ACGCGAGGGT CGGCGTGA
|
|---|
| Protein sequence | MFGDRSIAFK LILVITLCTS LIFTVILGYS YYRSKSVLQR ELENNARNLA LSSVNRVEAV
LASVTRVTEG LARSLENGRY SHRELLALLK DTLADNPEIY GSCAAFEPDT RESNARPYAP
YFFRSRGKIA YNNEDSFQYL RQDWYQISRE LGRTEWTEPY YGDNGSNILM ASCSVPFHET
SGGARRVKGV VVSDISLEWL TATVASIKVL KSGYAFLLSR NGTIVTHPSR EMIMNETVFS
LAEARNDPGL RALGRKMISG GSDFIPYTDL YGRRCWLYYA PIPSVGWTLA VVFPEAELLA
QVRSLSLTGA IMGLAGILLL TLAVVFIARS ITTPLRSLAA ATHQLAAGNF DLELPLVRSN
DEVGLLAHDF QAMKESLKDY IRNLTETTAA KERIQSELKV ATDIQASLLP RIFPAFPERP
EFDIFASMDP AKEVGGDFYD FFFIDDTNLC FLIADVSDKG VPAALYMMVA KTLLKSEAQR
LGEPDKILSS VNNILAADND SCMFATVFCA ILDTTCGEVR FANAGHNPPL TIDSTGIGYL
TLESGFVLGP MPDIVYTTQR LTMQPGDTLF LYTDGVTEAK NRKEELYGEP QLLDALRRGP
RDDLTETIHF IRAEVTRHAN GAPQSDDITM VAITYRGSGV TRGSA
|
|---|
| |