| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1518 |
|---|
| Symbol | |
|---|
| ID | 4572211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1621088 |
|---|
| End bp | 1621828 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639755562 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_901191 |
|---|
| Protein GI | 118579941 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.484594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCA AGGACCAGAC CGTTGTCGTC ACCGGCGGCA CCCGCGGGAT CGGACGGGCC
ATTGCGCTGG CCTTTGCCCG CAACGGCGCA CGGGTGTTTG CGGCGTACCT GAACAACGAT
GCGGCCGCAC GGGCTACCTG GGAGGAGGCC GAGAGCCTGG CAGGCTCCCT GGTCGCCATC
AAGGCCGACG TGGGCACGGC CGAAGGAGCC CGCGCCATCA TGGATGCGGC CGCGAAAGAG
ACGGGGCACA TCGACGTGCT GGTCAACAAC GCCGGCATCC TGAGAGACGG GCTGCTGGTC
ACCATGGCCG AACAGGATTG GGAGGAGGTC ATGCGGACAA ACCTGAACTC CCTCTTTCAC
TGCGGCAAAT GGGGCGCCAG AAAGATGCTG GGGCAACAGC GGGGCGCCAT CGTAACGGTC
TCATCCGTAT CCGCCCTCAT GGGAACGGCC GGCCAGACCA CCTACTCCGC CTCCAAGGGC
GCCGCCATCA GCTTCACCAA ATCCCTGGCC CGCGAGCTGG GGCCGCTAGG GATCCGGGTG
AACGCGGTGG TGGCCGGCCT GATACGTACC GACATGACCG CGCACCTGGA GGGGGAGGCG
CTGCAACGCA TCGTCCGCAC CACCTCCCTG GGGCGCAGCG GCACTCCCCA GGAAGTGGCC
GAGGCGGTCC TGTTCCTGGC CTCGGCGCGG GCTTCCTACA TCACCGGCCA GTCCCTGGTC
GTGGATGGCG GCATCGTCTG A
|
|---|
| Protein sequence | MEFKDQTVVV TGGTRGIGRA IALAFARNGA RVFAAYLNND AAARATWEEA ESLAGSLVAI
KADVGTAEGA RAIMDAAAKE TGHIDVLVNN AGILRDGLLV TMAEQDWEEV MRTNLNSLFH
CGKWGARKML GQQRGAIVTV SSVSALMGTA GQTTYSASKG AAISFTKSLA RELGPLGIRV
NAVVAGLIRT DMTAHLEGEA LQRIVRTTSL GRSGTPQEVA EAVLFLASAR ASYITGQSLV
VDGGIV
|
|---|
| |