Gene Ppro_1508 details

Gene Information

• Locus tag: Ppro_1508
• Symbol: atpC
• ID: 4572201
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 1613801
• End bp: 1614217
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 639755552
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_901181
• Protein GI: 118579931
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAAA AGATGAAGCT TGAGATTATA ACACCCTATG CCAAGGTGGT GGATGCCGAG 
GTGGACGAGG TCATGGCCAC CGGTGCGTTG GGCGAATTCG GCGTGCTCCC GGACCATGCC 
CCTTTCCTGA CATCGCTGAA GATCGGCGAG CTCTGCTACA AGAGCAACAG TGTGCTCTCC 
TGCATGGCGC TGAACTGGGG CTACTTCGAG ATCCGTGAAA ACAGGATTGT CATTCTGGTG 
GAGACCGCCG AGCATGCCCA TGAGATCGAC GTGGAGCGGG CCAGATCTGC CCAGACCCGC 
GCGGAGCAGG CGCTGAAGAC ACTGGGGCCG GAGGACAAGC AGTTCAAGGT CTACGAGGCG 
GCGCTGGAAC GCGCCCTGAT ACGCATGCAG GTGGCAGGAA AGGCAACCAG AAAATAG 

 

Protein sequence

MAEKMKLEII TPYAKVVDAE VDEVMATGAL GEFGVLPDHA PFLTSLKIGE LCYKSNSVLS 
CMALNWGYFE IRENRIVILV ETAEHAHEID VERARSAQTR AEQALKTLGP EDKQFKVYEA 
ALERALIRMQ VAGKATRK