| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1413 |
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| Symbol | |
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| ID | 4571982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 1508159 |
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| End bp | 1510579 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639755457 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_901087 |
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| Protein GI | 118579837 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0607109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCAT TTCTCGAGGC GATCCAGGAG AGGGTGCTGA TTCTGGACGG GGCCATGGGT
ACCATGCTTC AGGAGCGGGG GCTTCGGCCG GGCCAGTCTC CCGAAGAACT CAACCTGACC
ATGCCCGATG TGGTGGCGTC GGTCCACCGT GAGTATATCG AGGCTGGCGC CGACATCATC
ATCACCAACA GCTTCGGCGG ATCGCGCTTC AAGCTGGCCC ACTTTGGGCT GGAAGGGCGC
CTGGCCGAGA TCAACGCCCG CGCCGTGGAG ATTGCCCGTG GCGAGGCGCG GGGCAGGGCC
TATGTGGGCG GCTCCATGGG TCCCACCGGT CAGTTCGTGG AGCCCTTGGG TGAGGTTTCC
TTCGACCGTA TGAAAGAATC CTTCCGTGAG CAGGCCGAGG CGCTGGTCTC GGCCGGGGTC
GATCTGATCA GCCTGGAGAC CTTCCTGGAC ATCAAGGAGT GCCGCGCAGC GGTGATCGCC
ATCCGCGAGG TCTCGCCGAC CATCCCGATC ATCGCCATGA TGACTTTCGA TGACAACGGC
CGTTCCGTAT TGGGAACGCC GCCCGAGGCC GCCGCCATCA CCCTGGCCGC TGCTGGCGTC
GATATCGTCG GCTCCAACTG CGGGCTGGGG GTGGAGGGGA TCCACGACAT CCTGGTGCGC
ATGCGCCGGG TGACCTCCCT GCCGCTCATC TCCCAGGCCA ACGCGGGGCT GCCGATCCTG
AAAGACGGAA TCACCGTCTT CCCCGGAACC CCACGGGAGA TGACCGACTA CCACGACCGG
CTGATCAGCC TGGGGGTGCG GGTGATCGGC GGCTGCTGCG GCACCACGCC GGCACATATC
AGGGCCATGA AGGAGGCCCT TGCCGGCCGC CAGCAGGTTT GGCAGGAACC GACTCACCTG
GAAGGAATGA CCCTGCTCTC CTGCCGGGGC GGGTGGACCG CCGTGGGGCC CGGCCAGAAG
ACCGCCATCA TCGGCGAACG TATCAACCCC ACCGGCAAGA AGCTCTACTC CAAGGAACTG
CAGGAGGGAA AGGTCTCCTA CATCCGCCGC GAGGCCATGG AGCAGGCGCA GTTGGGGGCC
ACGTTGCTGG ACCTGAACGT GGGGGCGCCG GGGATCGACG AGCCGGTTGC CATGGAGCGG
GCCGTGTTCT GCGCCAGCGG GGCAGTCGGC GTGCCGCTGG TGCTGGATTC CTCCAGCCCT
GCCGCCCTGG AGGCGGGGCT CAAGGCGGCC GACGGCAAGG TGCTGATCAA CTCCGTCTCC
GGCGAGGCCA AGAGCCTCTC CCGGGTGCTG CCACTGGCCA AGAAGTACGG TGCAGCCCTG
ATCGGCCTGA CCCTGGATGC CAAGGGGATA CCGGACAGCG CCGAGGGGAG GCTGGCCATC
GCCCGCAGGA TCCGCAACGC CGCCCGGCGG CAGGGGATTC CTGACCAGGA CATCATCATC
GACTGCCTGA CCCTGACGGT CAGCGCCGAG CAGAAACGGG CGGCCGAGAC CCTGCGCACC
ATCCGTCTGG TCAAGGAGAA GCTGGGGCTC TCCACGGTGC TGGGGGTCAG CAACATCTCT
TTTGGCCTGC CCCAGCGGCC GCTGATCTCG TCCTCGTTCT TCTCCATGGC CATGGCCGCC
GGTCTGGATG CGGCCATCAT CAACCCAAGG GAAAAGGCCA TGATGGATGC CTGGCGTTCG
GCCATGGTGC TGCTCAACCG CGACCCACGG GCCGAAGCAT TCATCCAGAC CTATCGGGAC
GAACAGGCGG TTGCCACGCC CGCCGCCCCT GTTTCGGACG CGCCCCAGGA GATCCGGCAG
CGGCTGGGCC AGGCGGTGAT CAACGGCGAC AGGGACGGCA TCATCGGGCT GGTGGAAGAG
GCTCTGGCCC AGGGGCTGGC CCCGCTGCAG ATCAGCAACG AAGGATTCCT CCCCGGCCTG
GAGGAGGTGG GGCGGCGTTT CGAGAAGAAC ATCTTCTTCC TCCCCCAGGT GATGCAGTCG
GCCGATACCA TGCACGCCGG TTTCGCCCGC CTCAAGGAGG AGATGAAGGG GCAGCCTCTG
GAGAGCCGCG GCCGAATCCT GATGGCCACC GTGGAGGGGG ACATCCACGA TATCGGCAAG
AACATCGTCT GCACCCTGCT GGAGAATCAC GGCTTTGAGG TGTTCGACAT CGGCAAGAAC
GTGTCTGCCG CCACCATCGT CGCCAAGGCC AGGGAGTTCG GGGTGGATGC TGTGGGTCTC
TCGGCGCTGA TGACCACCAC CATGGCCGAG ATGGACACGG TCCTCAAGAA GCTCAAGGCG
GTGGGGATCA AGGCATTCAC CATGATCGGC GGAGCTGTGG TGACCCAGGA GTACGCCGAC
CGCATCGGCG CCGATATCTA CGCCCGTGAC GCCATGGAGG CGGTGGCCAA GGTCAAGAAA
CTGCTCCAGA TAGCCGATTA G
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| Protein sequence | MTPFLEAIQE RVLILDGAMG TMLQERGLRP GQSPEELNLT MPDVVASVHR EYIEAGADII
ITNSFGGSRF KLAHFGLEGR LAEINARAVE IARGEARGRA YVGGSMGPTG QFVEPLGEVS
FDRMKESFRE QAEALVSAGV DLISLETFLD IKECRAAVIA IREVSPTIPI IAMMTFDDNG
RSVLGTPPEA AAITLAAAGV DIVGSNCGLG VEGIHDILVR MRRVTSLPLI SQANAGLPIL
KDGITVFPGT PREMTDYHDR LISLGVRVIG GCCGTTPAHI RAMKEALAGR QQVWQEPTHL
EGMTLLSCRG GWTAVGPGQK TAIIGERINP TGKKLYSKEL QEGKVSYIRR EAMEQAQLGA
TLLDLNVGAP GIDEPVAMER AVFCASGAVG VPLVLDSSSP AALEAGLKAA DGKVLINSVS
GEAKSLSRVL PLAKKYGAAL IGLTLDAKGI PDSAEGRLAI ARRIRNAARR QGIPDQDIII
DCLTLTVSAE QKRAAETLRT IRLVKEKLGL STVLGVSNIS FGLPQRPLIS SSFFSMAMAA
GLDAAIINPR EKAMMDAWRS AMVLLNRDPR AEAFIQTYRD EQAVATPAAP VSDAPQEIRQ
RLGQAVINGD RDGIIGLVEE ALAQGLAPLQ ISNEGFLPGL EEVGRRFEKN IFFLPQVMQS
ADTMHAGFAR LKEEMKGQPL ESRGRILMAT VEGDIHDIGK NIVCTLLENH GFEVFDIGKN
VSAATIVAKA REFGVDAVGL SALMTTTMAE MDTVLKKLKA VGIKAFTMIG GAVVTQEYAD
RIGADIYARD AMEAVAKVKK LLQIAD
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