Gene Ppro_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1342 
Symbol 
ID4573829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1420166 
End bp1423000 
Gene Length2835 bp 
Protein Length944 aa 
Translation table11 
GC content63% 
IMG OID639755388 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_901020 
Protein GI118579770 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACCG GGACACAGCC CCCCCGAACA CACTACCAAC TCGCCTGTTT CCGCCCCCCC 
CTTGCTCTGG CTCTGGCGCT AGGGGCGGTG GGGAGCCTCG GCGCCTGCTC CCTCGGCCAG
CAGCCGACCA GCAATGACTG GCTGCTGGGG GGAGCGCTGC TGACATCGAT ACTGCTCCTG
GTTCTCTCCC TGCGCCATTC GGCGCACCTC CGGGACAGGA AGTCGAAACT TCAGGCTAAA
CTGAGGGAGA AAGAGCTGCG CCTGGACCTG GTCAGGAAGA CATTCCAGAT CGGGTTCTGG
GAGTATGAAC CCGGAGGCGA CGGAGAGCAC GGCGACGATG CCATGCTTCG CTTCCTCGGA
AAACAGGCCG ATGAATCAGC CTCTCTCTAC GAAAGCTGGC GAGCCTCGGT GTTACCTGAG
GACCTGGTCG AGGTCGAGGG GGGGCTACGT GCCGCACTGA ACGAAAAGAC ACCCTTCGAC
ACCACCTACC GCTTCCGCCG GGACGACGGC CAACTGCGCG TGATCAGGGC ACATGGCCGG
TTGCGGAAGC GCGAAGAGGG CAGGCCACCA TGCCTGATCG GCGTGAGCAA GGACATCACC
GAACTGGTCC AGAGCGAGCA TGCCATGAGG GACAACGAGC GTTTTCTCAA GATCCTGGCC
AATGTCATTC CCGGCATGGT GGGATACTGG ACCTATGAAC AGTACTGCGC CTTTGCCAAC
GACGAATACC AGCTCTGGTT CGGCAGGAGT CCCGAAGAGA TGCTGGGCAT GCACATACGA
GAACTGCTGG GTACGGAGCT GTATCAAGAC ATCGAGCCAT TCATCCACGG GGCGCTGGAG
GGAGTTCCCC AGCACTTCCA GCATGCATTG ACACGGTCCG ATGGCCAGCA CTGCCACACC
ATGATCCACT ACATACCGGA CATGGAGGGG GAGCAGGTCC GCGGTTTTTA CGAACTGGTC
TCGGACATCA CCGAGCTCAA GCAGACCCAG TTCCGGTTGG AGGAACTGAA CACGGCCCTG
CAGCAACGCA CCGAGGAGGC CGAGGCGGCC AACGCGGCCA AAAGCCGCTT CCTGGCGAAC
ATGAGCCACG AAATCCGCAC CCCCATGAAT GCCGTGCTGG GACTGCTGCA CCTCTTGCAG
CGCACCGAGC TCTCGCCCCG GCAGCATGAC TACATCGAAA AGGTGCAGAT GGCCTCCCGT
TCTCTGCTGG GAATCCTGAA CGACATCCTG GATTTTTCCA AGATCGAGGC GGACAAGATG
GAGCTGGAGA CGGTTCCTTT CTTTCCCCAG GAACTGCTGA ACAACCTGGC GGTGTTCCTC
TCCCCTTCCT TGCAGAACAA GAAGGTTGAA CTGCTCTTCG ACGTCGACGC CGACCTGCCC
CCCACCCTCC TGGGGGACGC CCTGCGGCTG CAGCAGGTGC TGCTCAACCT GACGGGAAAC
GCGGTCAAGT TCACCGAGCA GGGACGGATT GTCGTTACCA TCCAGGTAGT ATCCCTCACC
CCGGACCAGG CCCGGGTCAG GTTCTCGGTG AAGGATACCG GCATCGGCAT CCCGGCCGAC
AAACTGGAGA GCGTCTTCAC GGGATTCGTG CAGGCCGAGT CCTCCACCAC CCGACGTTTC
GGCGGCAGCG GTCTGGGACT GACCATCAGT CGCCGCCTGG TTCGTCTGAT GGGGGGCGAA
CTGGAGGTGG AAAGCACGCT GGGCAAGGGG AGCACCTTCC ACTTCACCAT CACCCTTGGC
CGGGACGGTG ACACGCCGGC CATGAACGGC CGCGCGTACA CCGGCCGCAA CGGTGCAGGA
CAGAGGAGTC GCTTGAAGGG GTTGCACCTG CTGGTGGTGG AGGACAACCC CATCAACCGA
CAGATCGCCC AGGAACTGCT CAGCCAGGAG GGTGCCGGCG TCGAAGTCGC CTCAAGCGGC
CGCCAGGGAC TGGACCTGAT CGCCCGGGCA CAGGCCCCGT TCGACGCGGT GCTGATGGAC
ATCCAGATGC CGGACATGGA TGGCTACTCA GCCTCGCGCC GGATTCGCGA TGCCCTGGGC
ATGATCAATC TCCCCATCAT CGCCATGACC GCCAACGCGC TCCCGGACGA CCGCAGGCGG
TGCCATGCCG CGGGCATGGA CGGCCATATT GCCAAACCGA TCGATCCGGA GACGCTGATC
GCCGTCCTGC AGACCCACTG CGGCGACACC ACGAAGCAGG CGGAACCGCA GACGGCAGAT
TCAGTCCTCG GTGGTGCACA GCCCGAGTTT TCGCCACAAG ATGCCCTCAC CCGCCTGAAC
AACAACCGCG GCCTGTATGC CCGGCTGGCC CGTTCCTTTG AACGTGATCA GGCCGCAGTC
GCGGAACGCG TGCGCGACCA GTTGCGGCAG GGGCAGATTG ACAGTGCCGC CAGCGACCTG
CATACCCTCA AGGGGGTGTC GGCGACCCTG GGCGCCATGG CACTGTCCCG TTGCGCGGCC
GAAGCTGAAG CGCTGCTCCG CGGAGGCCGG CCCCTGGGCG AAATCCTGCT CAACGATCTT
GAGCGGCACT TCGCCGAGGC GTGCGACTTA TTGCGCCGGT TGGCCGACGA GCTTGACCCG
CCTCGAGAGG GGGCCGGAGA GGAATTGCCT GACATCACCC CGGACCGGGG AGAGGTGGCC
GCGCGCCTGG CTTTCATGGA AGATCTGCTG CGCGTCGGCA ACATGCGGGC GCTGAACGAA
TACGAGGGGA TCAGGCGGAT CTGCGGCAGG GATCTGCGCC AACGGTTCTT CCTGCTGGAC
GATGCCGTCA AACGGCTCAA TTTTCCCGCT GCCGCCACCC AATGCCGAAT CATTCGAGAG
GAACTATCAC CATGA
 
Protein sequence
METGTQPPRT HYQLACFRPP LALALALGAV GSLGACSLGQ QPTSNDWLLG GALLTSILLL 
VLSLRHSAHL RDRKSKLQAK LREKELRLDL VRKTFQIGFW EYEPGGDGEH GDDAMLRFLG
KQADESASLY ESWRASVLPE DLVEVEGGLR AALNEKTPFD TTYRFRRDDG QLRVIRAHGR
LRKREEGRPP CLIGVSKDIT ELVQSEHAMR DNERFLKILA NVIPGMVGYW TYEQYCAFAN
DEYQLWFGRS PEEMLGMHIR ELLGTELYQD IEPFIHGALE GVPQHFQHAL TRSDGQHCHT
MIHYIPDMEG EQVRGFYELV SDITELKQTQ FRLEELNTAL QQRTEEAEAA NAAKSRFLAN
MSHEIRTPMN AVLGLLHLLQ RTELSPRQHD YIEKVQMASR SLLGILNDIL DFSKIEADKM
ELETVPFFPQ ELLNNLAVFL SPSLQNKKVE LLFDVDADLP PTLLGDALRL QQVLLNLTGN
AVKFTEQGRI VVTIQVVSLT PDQARVRFSV KDTGIGIPAD KLESVFTGFV QAESSTTRRF
GGSGLGLTIS RRLVRLMGGE LEVESTLGKG STFHFTITLG RDGDTPAMNG RAYTGRNGAG
QRSRLKGLHL LVVEDNPINR QIAQELLSQE GAGVEVASSG RQGLDLIARA QAPFDAVLMD
IQMPDMDGYS ASRRIRDALG MINLPIIAMT ANALPDDRRR CHAAGMDGHI AKPIDPETLI
AVLQTHCGDT TKQAEPQTAD SVLGGAQPEF SPQDALTRLN NNRGLYARLA RSFERDQAAV
AERVRDQLRQ GQIDSAASDL HTLKGVSATL GAMALSRCAA EAEALLRGGR PLGEILLNDL
ERHFAEACDL LRRLADELDP PREGAGEELP DITPDRGEVA ARLAFMEDLL RVGNMRALNE
YEGIRRICGR DLRQRFFLLD DAVKRLNFPA AATQCRIIRE ELSP