Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1335 |
Symbol | |
ID | 4573822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1410655 |
End bp | 1411728 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639755381 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_901013 |
Protein GI | 118579763 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.467391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATTC AAGTCCTTCC GCTCCCCGCG GAAAAAATGA AACAGAAAGC ACAAGACGAA ACCAAGCTCA GCTTTGGCCG GCAATTCACC GACCGCATGC TGCTGGTGGA ATGGAAGGCC GACCAGGGGT GGTGCGACGC GCGCATCCAG CCCTACGCTC CCTTTGTACT TGATCCCTCC TGCCTGGTGT TCCACTACGC CCAGGAGATA TTCGAAGGCC TGAAGGCCTA CAAATGGGCC GACGGCAGGA TAGCGCTGTT CCGTCCCGAG ATGAACGCAC GGCGCTTCAA CCAGTCCGCC GACCGGCTCT GCATGCCGGA CGTGCCCGAG GAACTGTTCC TGGGTGGCAT CGAGAAACTG CTCTCCCTGG AGAAGGAGTG GATTCCCGGC GCGCCGGGAA CCTCGCTCTA CATCCGGCCG GCCATGATCG CCGTGGAACC GGTGCTGGGC GTCAAGCCGT CAAGCCACTA CTACTTCTTC GTCATCCTCT CCCCGGTGGG CGCCTACTAC TCCGCAGGCT TCAACCCGGT CAGCATCATG GTGGAAGACC ACTACGTGCG CGCCGTACCC GGCGGCACCG GCGAAGCCAA AACCGGCGGC AACTACGCCA GCTCGCTCAA GGGGGCGCTG GAGGCCAAGA ACAAGGGCTA TGACCAGGTG CTCTGGCTGG ACGGCCGCGA ACAGCGCTAT GTCGAGGAAG TCGGATCCAT GAACATGTTC TTCGTCTATG GCGACACAAT CGTTACCGCG GCCATGAACG GCTCGATCCT CTCCGGCATC ACCCGCGATT CCATACTCAA ACTGGCTGTC TCATTGGGAT ACCGGGCAGA GGAACGCAGC ATCGAAATCA ATGAGTTGAT GGACGACATC AGGGGCGGCA AGGTGACCGA GGCCTTTGGC AGCGGCACCG CGGCCGTGGT CTCGCCGGTG GGTAAACTCT GCTTCAAGGA CGAGGTCGTC CACCTGAGCG GAGGCACGGT GGGCGCGATA ACCCAGAAAC TGTACGACAC CCTGACCGGC ATCCAGACCG GAAAAATCAA GGACGAGTTC GGCTGGGTCA GGTTCGTCGC CTGA
|
Protein sequence | MDIQVLPLPA EKMKQKAQDE TKLSFGRQFT DRMLLVEWKA DQGWCDARIQ PYAPFVLDPS CLVFHYAQEI FEGLKAYKWA DGRIALFRPE MNARRFNQSA DRLCMPDVPE ELFLGGIEKL LSLEKEWIPG APGTSLYIRP AMIAVEPVLG VKPSSHYYFF VILSPVGAYY SAGFNPVSIM VEDHYVRAVP GGTGEAKTGG NYASSLKGAL EAKNKGYDQV LWLDGREQRY VEEVGSMNMF FVYGDTIVTA AMNGSILSGI TRDSILKLAV SLGYRAEERS IEINELMDDI RGGKVTEAFG SGTAAVVSPV GKLCFKDEVV HLSGGTVGAI TQKLYDTLTG IQTGKIKDEF GWVRFVA
|
| |