Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1330 |
Symbol | |
ID | 4573628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 1405613 |
End bp | 1407067 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639755375 |
Product | integrase catalytic subunit |
Protein accession | YP_901008 |
Protein GI | 118579758 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.052646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA ATGTAGTCCC GAAGCAGCGC TGGGCCAGGT TTCGGCTGCA GGTGATCGGA CCGCTATTGG CGAGCCCTGC CGCGAGCGGG GAGTTGCAGG GAAAGATCCG GGAATTGAGC GAGAGGGTGT ACCGGCATCC CCTGCTCCCG GAGAAGTCTA TACGACTTGG TTTTTCCACG CTCGAACGCT GGTACTACCA GGCGAAGGAC GCCGCGGACC CGATCGCTGC GCTGAGTCGC AAGGCGCGTT CGGACGCCGG GTGTCAGATT GCGCTGTCCG AGGCGCTCTT GAGCGCCCTG GAAGTGCAGT ATGCCAGGTA TCCTCGCTGG ACGGTGCAAC TGCACTACGA CAACCTCGCC GCCGAAGTGG CCCAAAAGCC CCAGATGGGA GCCTTGCCGA GCTACCAGAG CGTGCTTCGC CGAATGCGGG AGAAGGGGTG GCAGAAAAGG CGCGAGCCCG CGAACCCGAC CGAAGGACAA CGCCGCGCCG TCCGGCGCCG CGAAAGCCGT GAGATTCGCG GCTATGAGGC GAGCCACGTG CACGCCCTGT GGCACCTCGA CTTCCACCAG GGAAGCCTCA AGGTGCTGGA CGAGGAGGGG GGCTGGCAGA CGCCCCTGGT GTGCGCGGTT CTGGACGACC GGAGCAGGCT CTGCTGCCAT CTGCAGTGGT ATCTGGCGGA AAGCGCCCAG AACCTCGCGC ATGCTCTCAC GCAGGCGATG CTGAAACGTG GGCTTCCCAG GGCTCTGATG ACCGATAATG GAAGCGCGAT GCTGGCGGAG GAAACCCGGG AGGGGCTGGC CCGACTCGGG GTGAGCCACG ACACAACCCT TCCTTACTCG CCCTATATGA ACGGGAAACA GGAGGTGTTC TGGGCGCAGC TTGAGGGACG TCTCATGGAG CTTTTGCGCG GGGTGAGCCC CTTGCGGCTG GAGTTCCTCA ACCGCACCAC CCAGGCGTGG GTCGAACAGG ACTATCACCG CCGTACCCAC AGCGAGATCG GCTGCGCTCC GATCGAGCGC CTGCTCGCCG GACCGGAGGT CTCCCGCTCG GCTCCCGACA TGGACTCCTT GAATCTCGCC TTCACCCGCC AGGTTACGCG CACCCAGCGC AAAAGCGATG CAACCGTGAC GGTCGAGGGG GTGCGCTTCG AGGTCCCGTC GCGGTTCAGG CATCTCCCCC GCCTGACGTT ACGCCATGCC GGTTGGGACG TAAGCCGGAT GGTTCTAGTG GATCCCGACA GCTGCAATCC CTTGGCCCGG CTGCTCCCCC AGGACAAGGA GAAAAACGCC TCCGGTCAGC GCCGCACTCT GGAACCGGTT GCGGCGCAGT CGGCCCAGGC GAACGCCTCA CCCGAGGAGA TGCCCGCACT GCTTCGCAAG TGGCTGGCGG ATTACGCCGC CACCGGGCTT CCACCGGCCT ATCTTGCCGT GAAGGAGGGT CCCGATGAAC GATAA
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Protein sequence | MKKNVVPKQR WARFRLQVIG PLLASPAASG ELQGKIRELS ERVYRHPLLP EKSIRLGFST LERWYYQAKD AADPIAALSR KARSDAGCQI ALSEALLSAL EVQYARYPRW TVQLHYDNLA AEVAQKPQMG ALPSYQSVLR RMREKGWQKR REPANPTEGQ RRAVRRRESR EIRGYEASHV HALWHLDFHQ GSLKVLDEEG GWQTPLVCAV LDDRSRLCCH LQWYLAESAQ NLAHALTQAM LKRGLPRALM TDNGSAMLAE ETREGLARLG VSHDTTLPYS PYMNGKQEVF WAQLEGRLME LLRGVSPLRL EFLNRTTQAW VEQDYHRRTH SEIGCAPIER LLAGPEVSRS APDMDSLNLA FTRQVTRTQR KSDATVTVEG VRFEVPSRFR HLPRLTLRHA GWDVSRMVLV DPDSCNPLAR LLPQDKEKNA SGQRRTLEPV AAQSAQANAS PEEMPALLRK WLADYAATGL PPAYLAVKEG PDER
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