| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1317 |
|---|
| Symbol | |
|---|
| ID | 4572366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1391257 |
|---|
| End bp | 1392555 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639755361 |
|---|
| Product | zinc finger SWIM domain-containing protein |
|---|
| Protein accession | YP_900995 |
|---|
| Protein GI | 118579745 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4715] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCG TCAAGACCAT GCTCAAAGGG CTCACCCACG AGGAACTCCG TGAATGGGCC
GGCGACAGGA TATTCGACCG CGGAAGAAAT TACATCTCCC GTGTCTCGCA ACTGTCGCGT
ACCGAGGATG GAACCTTGGC GGCCTGGGTC TCCGGTAGCG ATGAATATGC CACCACGGTC
AGGCGCGATG GCAGGGAGGA TTTTGACTAT GACTGTACCT GCCCCTATGA TGACGGCCCC
TGCAAGCACG CGGTTGCGGT GCTGCTGGCG GCTGCCGGGC AGTTGAATGG AGGGGGGGCG
ATCCCTCTCC TGGATCCCTG CGCTGACCTG GCGCTGGAGA TGTTCGGTGA TCCTGAAGAT
GATGAGGAGT GGGCGGATGC TGAAGAGCCG GATGTGGAGT CATCCTCCCC GGAAGAGGCC
AAAGGTCGTT TGCCCAGGAT CGAATCGATT CTGGCGGAGA AAAGCCGGGA AGAACTCGTG
TCGCTGCTGG CTGGGCTTGC CTCCGATTTT CCGGATGTAG CCCGCCGGAT CAACGAGACG
GCGCAGCTTG AGACTGGACA GGTGGGAAAA ATCGTCTGTG CCTTGAAAAA GGAGATCCGT
TCGCTGACAG CGGAGGATGT CTGGTACAAC CCCTGGAAGA GCGAGGGAAA CCTGCCGGAC
TATTCCCATG TGGAGCAGCA GTTGCGTGCG CTATCGGACA GGGGGCACGC CGATGCTGTT
CTGGAGCTGG GGGAGGAGTT GTGGCAGCGG GGCAACAAAC AGGTCGAGTG CTCCCACGAC
GAGGGGGATA CCGCCATGAA GATCGCCGCC TGCCTGGAGA TCGTGCTGAG GGCGCTGCCT
TCCAGCTCAA TGCCCCGCGT GGAGCAGGTG CAGTGGCTGG TGGATCACGA ACTTGATGAT
GAATACGCTC TGCTGGCCGG GATAGATAAA CTCCTCAATG GCCCGCTCTA CGGGGAAACG
GAGTGGTCTA AGCTTGCCGA GACGCTTGAA GTGCGCCTGG AAAACAGGGA ACTGCCAAAA
TCGGGGAGTT TTTCAGAAAC CTATCGCCGC GAGCGGGTCA TGCGGTGGCT CTGCCACGCC
TATCGGCGAA GCGGGCGGCA GAAAAAGGTC CTCCCGCTCC TGGAACGGGA AGCTGACCGT
TGCCGGAGTT ACGAGACACT GGTGAATGCC CTGCTGGAGG CGGGGGAGCC CGACCGGGCG
CGTCAGTGGT GCATTCGGGG ATTCGACAGA ACGATAAAGG ATGCACCCGG AATAGCCAGT
GCCCTGCAAA AGCGTTTACG GCAACTGGCC GAGGAGTGA
|
|---|
| Protein sequence | MKSVKTMLKG LTHEELREWA GDRIFDRGRN YISRVSQLSR TEDGTLAAWV SGSDEYATTV
RRDGREDFDY DCTCPYDDGP CKHAVAVLLA AAGQLNGGGA IPLLDPCADL ALEMFGDPED
DEEWADAEEP DVESSSPEEA KGRLPRIESI LAEKSREELV SLLAGLASDF PDVARRINET
AQLETGQVGK IVCALKKEIR SLTAEDVWYN PWKSEGNLPD YSHVEQQLRA LSDRGHADAV
LELGEELWQR GNKQVECSHD EGDTAMKIAA CLEIVLRALP SSSMPRVEQV QWLVDHELDD
EYALLAGIDK LLNGPLYGET EWSKLAETLE VRLENRELPK SGSFSETYRR ERVMRWLCHA
YRRSGRQKKV LPLLEREADR CRSYETLVNA LLEAGEPDRA RQWCIRGFDR TIKDAPGIAS
ALQKRLRQLA EE
|
|---|
| |