| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1311 |
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| Symbol | |
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| ID | 4572359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 1383151 |
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| End bp | 1385316 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639755355 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_900989 |
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| Protein GI | 118579739 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00111867 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTGTC ATCTGATTAA CGCAATTCCA AGGCCATGGG CGTCCATCCA GGGCCTTGTT
CACGAAAGGC AGATCATGTT TCGAACCACC CGAAGACCTT TTGTTATCGC ATTGGCAGGT
ATTTCGCTCG TTTCCCTTGT CAGTCTCTCC TGTCATGCCG ATGACGCGCT CACCAGTGCC
GTATCGCAGT TTCGGGAGAA GGACCATACG GACGGTTTTG CTTTGGCACT GAAAACTGCC
GATTCTCCGC AGCGTACGTT TTTGCTGGGG GTCAGCGCCC TCCGTCAAGG GAAGACCGAA
GAATCCCTGT CCCTGTTGGG GGAGGCTGAG CAGAAATTGC CACTGCTGGG AGATTATGCC
GCCTACTATC AGGCCGAGGC ATTGTTTAAG CTGAAAAGGT ATCCCGAGGC GGCTGCCAAG
GCGGTTGCCA TACCCAAGGA GTACCCGGTT TCTTTGCTGG TCCGACGTTC GTTGAAGCTT
CAACTCGACA GCGTTGTGGC TGCTGGAGAT TTCGCCGCAG CGCTCAAGCT GTCCCAGGCT
TTTGTCGAGA AATACCCCTC TGGCGCGGAT TCCGTGGACG CGCTTTTCCT GTCCGGCCTC
TGCCGCGAGG AGCTGGGCAA TACGAACGGC GCGGTCCAGA TTTACCGGAG CATCTGGCTG
AATACCCCGC TTGCCTTACA GGCTGTGAAA TCCCAGGACC GCCTCAAGGA ACTGGAGAAG
CGGGGCATCG CCAGCAACTC TTTTACGGCT GAGGAACTGC TTCGCCGAGC CTCCGCGTTT
TCCGCGAAAA ACTCCTTTTC GCACTCACTG CGGACACTCC AGGCAATTCC GCTGGAAGGA
CAGTCAGCGG CCCTGGTCGA TCTCGTTATG TTGCGTACCG GCCTGAACCA GTATCGCATG
CGCAACTGGA AGGAGGCCGA AAAGAGTCTG GTCAGGGCAG GAACCAGCAA CAATGTCTCC
ATACGATCCG AAGCTCGCTT TTGGCAGGCC AAAGCCTTGG AACATCTTGA CCAGGGTGGA
CGGGCTTTTA CCATGTTAAT GGAATTGGCT GGCGAGGGGC AGAAACAGGA ATTCGCCGAT
GATGCCCTGA TGGAGGCCGC CGACCTGCGA AAGGGGGCAG GGAGCTATGC CGAGGCTGCT
CTTCTGTTTG AAAGAGTTGC TCTACTCTGC CCGGAATCAA AGCATGTCAG TCGGGCTGCC
TGGGAGTCGG GCTGGTGTCA TTACCTTGCG GGAGAACATG CTGCGGCTGC CGTGTCATTC
AAGGCGCTTT TGAATGAGGG CGGCCAGCGG GAAAAGGCTC TCTACTGGCT GGGACGTGTG
CTGGAGAACA GCGGCAATGC AGAGTCGGCA GACTGTTACA GCACGCTTTT GAACGAATAT
CCGGCAGGTT TTTACGCCGC GTGGCACCGG GAGAAGAAGG GGATCCAGGA CAACCGTGAA
TCCCTTGCCC AACGTTCCAC CATGATTGCT TCACCGCTTC CGTCCGGTTA TGAAAAACCG
CTTCTGTTGG CTTCACTGGG CATGATTGAC GAGGCCCGTC GGGAGGCGGC TGTTCGACGG
AAGAATGGTG ACAAAAAGGG GCAGTATCCC GGCTTTGCGC GACTCTATCT GGAAATGGGC
GATTATGGAT CAGCCATTTA CCTCTTTCAG CAGAACCGCT CACTAAAGTG GGAAAAAGAA
AGCTTGCCAC TCTGGACCGC AGGTTATCCC CTGGCCTATA CGGGTCAGGT GGCGCAGCAG
ACAGCTGCCA ACAGCCTCTC CGAGGCGCTG ATTTATGCCC TGATTCGTGC CGAGAGCAGT
TTCTCGCCTA CAGTGAAATC TCCGGCAGGG GCCATCGGCC TGATGCAGCT CATGCCGGCA
ACGGCCAAGG CAACTGCCCG CGAAAAGGGC ACCTTTGATC CCGCTCGACT GACAACCCCC
GATTACAACA TCATGTTGGG GACGCGGCAT TTTCGCGATC TTTTGAATGG GTATGACGGC
GATGTGGTTT TTTCGGTCGC CGCCTACAAT GCCGGTGCAG GTGCGGTGGC GCGCTGGAGA
AAGAGGCTTA AAGGGCTTGA TAAGGATGAA TTCATTGAAA GCATACCCTA TAAGGAGACT
CGTGACTACG TCAAAAAGGT CTATGCTGCG GCCGCCACCT ACCGGCAGTT GTATGGGTTG
CGCTGA
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| Protein sequence | MVCHLINAIP RPWASIQGLV HERQIMFRTT RRPFVIALAG ISLVSLVSLS CHADDALTSA
VSQFREKDHT DGFALALKTA DSPQRTFLLG VSALRQGKTE ESLSLLGEAE QKLPLLGDYA
AYYQAEALFK LKRYPEAAAK AVAIPKEYPV SLLVRRSLKL QLDSVVAAGD FAAALKLSQA
FVEKYPSGAD SVDALFLSGL CREELGNTNG AVQIYRSIWL NTPLALQAVK SQDRLKELEK
RGIASNSFTA EELLRRASAF SAKNSFSHSL RTLQAIPLEG QSAALVDLVM LRTGLNQYRM
RNWKEAEKSL VRAGTSNNVS IRSEARFWQA KALEHLDQGG RAFTMLMELA GEGQKQEFAD
DALMEAADLR KGAGSYAEAA LLFERVALLC PESKHVSRAA WESGWCHYLA GEHAAAAVSF
KALLNEGGQR EKALYWLGRV LENSGNAESA DCYSTLLNEY PAGFYAAWHR EKKGIQDNRE
SLAQRSTMIA SPLPSGYEKP LLLASLGMID EARREAAVRR KNGDKKGQYP GFARLYLEMG
DYGSAIYLFQ QNRSLKWEKE SLPLWTAGYP LAYTGQVAQQ TAANSLSEAL IYALIRAESS
FSPTVKSPAG AIGLMQLMPA TAKATAREKG TFDPARLTTP DYNIMLGTRH FRDLLNGYDG
DVVFSVAAYN AGAGAVARWR KRLKGLDKDE FIESIPYKET RDYVKKVYAA AATYRQLYGL
R
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