Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1284 |
Symbol | |
ID | 4573778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1345793 |
End bp | 1347964 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639755324 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_900963 |
Protein GI | 118579713 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.811968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCAT TCCCGAATTT CAAGGATATT GCCTACGAAC CGCACAGGAA GGTCGTGGAC ACACAGACCT GGCAGAAGGA GTTCACAGAG TCCGTCGGAG AACCGCCGAT CTGGATGACC AACGAGCAGA TCCCGGTCAA GGCGCTCTAC ACCGAGGAGG ACATCAAGGG CATCGAGCAC ATCGGATCCA CCGCCGGTAT CGCCCCCAAC CTGCGTGGCC CCTACCCCAC CATGTACGTG CAGCGCCCCT GGACGATCCG CCAGTACGCC GGTTTCTCCA CCGCCGAGGA GAGCAACGCC TTCTACCGCC GCAACCTGGC CATGGGGCAG AAAGGGCTCT CGGTGGCCTT CGACCTGGCC ACCCACCGCG GCTATGACTC GGACCATCCC CGGGTGGTGG GAGATGTGGG CAAGGCCGGG GTTGCCGTCG ACTCCATCCT GGACGCCGAG ATCCTCTTTT CCGGCATCCC GCTGAACAAG ATGTCCGTCT CCATGACCAT GAACGGCGCG GTCCTGCCGG TTCTGGCCTT CTACATCGTG GCCGGTCTGG AGCAGGGGGC GCAGCTGGAC GAGCTGTCCG GCACGATCCA GAACGACATC CTCAAGGAGT TCATGGTGCG CAACACCTAC ATCTATGGGC CGGAAGGCTC CATGCGCATC ATCGGCGACA TCTTTGAGTA CACATCCAAA TACATGCCCA AGTTCAACAG CATAAGCATC TCCGGCTATC ACATGCAGGA AGCCGGCGCC ACCGCCGACA TCGAGCTGGC CTACACCATC GCCGACGGCC TGGAATACAT CCGCACCGGC ATCACCGCCG GCCTGGAGGT GGACAAATTC GCGCCGCGTC TCTCCTTCTT CTGGGCCGAG GGGATGAACT ACTTCATGGA GGTCTCCAAA CTGCGTGCCG GTCGACTTTT GTGGGCCAAA CTGCTCAAGC AATTCAACCC GAAGAATCCA AAATCCCTGG CCCTGCGCAC CCATTCTCAG ACCTCGGGGT GGAGCCTCAC GGAACAGGAT CCCTTTAACA ACGTCACCCG CACCTGCCTG GAGGCAATGG CAGCCACCCT GGGGCACACC CAGTCGCTGC ACACCAACGC CCTGGACGAG GCCATCGCCC TGCCCACCGA CTTCTCGGCC CGCATCGCCC GCAACACCCA GATTTACCTG CAGAGCGAAA CTTCCATCTG CAAGGCAATC GACCCCTGGG GCGGCTCCTA CTACGTGGAA TGGCTGACCG ACCAGCTGCG CAAGAAGGCC TGGGCGCACA TCGTGGAGGT GGAGTCCCTG GGAGGCATGG CCAAGGCCAT TGAGACTGGC CTGCCCAAGA TGCGCATCGA AGAGGCGGCG GCCCGCAAAC AGGCCAGGAT CGACTCCAAG GCCGAGCCGA TCATCGGCGT CAACAAGTTC CGGCTGGAGC AGGAGGATCC CATCGACATC CTCTCCATCG ACAACACTGC CGTACGCGAA TCCCAGATCG CCCGACTGAA GAAGCTGCGC GCCGAACGGG ACAACGCCAA GGTCCAGGGA ATCCTGGAGG CCATAACCAG GGCGGCCGAA TCCCGGGAGA ACGGCAACCT GCTGGAGCTG GCGGTGGAGG CTGCCAAGGC GCGGGCCAGC CTGGGCGAGA TATCCGACGC CATGGAGAAA GTCTATCCCC GCCACAAGGC GGTCATCCGC TCCATCTCCG GAATCTACAG CTCCGAGTAC GCTGAAAACG AAGAGGTGCA GGAGGTACAG CGCATGTGCG CCGAGTTCGA GGAGCAGGAG GGGCGGCGGC CCCGCATCCT GGTGGCCAAG ATGGGACAGG ACGGCCACGA CCGGGGCGCC AAGGTCATCG CCACCGCCTT CTCCGACCTG GGGTTTGATG TGGATGTGGG TCCGCTGTTC CAGACTCCGG AAGAGACGGC CGACATGGCG GTGGAGAACG ACGTGCACGT GGTCGGCTTC AGCTCATTGG CAGCCGGGCA CAAGACCCTG CTTCCCCAGC TGGTGGAGGA GCTCAGGAAG CGGGGACGGG GCGATATCCT GGTGCAGATC GGCGGCGTCA TCCCGGCCCA GGACTACCAG TACCTGTACG ACCACGGCGC CGACCTGATC TTCGGACCCG GCACGGTCAT CCCCATCGCG GCCAGGAAGA CCCTGGAGCT GCTCAAGAAA CGACTGGCAT GA
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Protein sequence | MSSFPNFKDI AYEPHRKVVD TQTWQKEFTE SVGEPPIWMT NEQIPVKALY TEEDIKGIEH IGSTAGIAPN LRGPYPTMYV QRPWTIRQYA GFSTAEESNA FYRRNLAMGQ KGLSVAFDLA THRGYDSDHP RVVGDVGKAG VAVDSILDAE ILFSGIPLNK MSVSMTMNGA VLPVLAFYIV AGLEQGAQLD ELSGTIQNDI LKEFMVRNTY IYGPEGSMRI IGDIFEYTSK YMPKFNSISI SGYHMQEAGA TADIELAYTI ADGLEYIRTG ITAGLEVDKF APRLSFFWAE GMNYFMEVSK LRAGRLLWAK LLKQFNPKNP KSLALRTHSQ TSGWSLTEQD PFNNVTRTCL EAMAATLGHT QSLHTNALDE AIALPTDFSA RIARNTQIYL QSETSICKAI DPWGGSYYVE WLTDQLRKKA WAHIVEVESL GGMAKAIETG LPKMRIEEAA ARKQARIDSK AEPIIGVNKF RLEQEDPIDI LSIDNTAVRE SQIARLKKLR AERDNAKVQG ILEAITRAAE SRENGNLLEL AVEAAKARAS LGEISDAMEK VYPRHKAVIR SISGIYSSEY AENEEVQEVQ RMCAEFEEQE GRRPRILVAK MGQDGHDRGA KVIATAFSDL GFDVDVGPLF QTPEETADMA VENDVHVVGF SSLAAGHKTL LPQLVEELRK RGRGDILVQI GGVIPAQDYQ YLYDHGADLI FGPGTVIPIA ARKTLELLKK RLA
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