| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1265 |
|---|
| Symbol | |
|---|
| ID | 4574403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1329030 |
|---|
| End bp | 1330187 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639755305 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_900944 |
|---|
| Protein GI | 118579694 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1865] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00387767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCG AAACCTGTTA CGACGGCGTG GAGATCCACC GGGAGGACCG GATCATCTAC
GCCAGATTCC TGCTGCCGCA CCAGGTGCTC TCCACCTGCC GGGCAGCCGG CGGCATGCGG
GACGACCTGG AGTATGTCTA CAACCACCAG AGCTGCGAGC CCTCGGGGCA TCACCACGGG
GTGGCCATGA AGCTGGCCAG GGAGCCGGAG CGCTACCGCA AGCTGATCTG CGACCGCCAC
GGCCTGCCCC ACGATGTCTG CGCCACCCTG GGCACGGCGG CCAACATGAA GAACGCCTGC
ATCGAGACCG CCAGGTTCCG TGACATCTCC GTCGTGGTGG TCTGCACCGG CGGAGTGGAG
GGGAACGCGG GACGGGCCGG TGATCCGGCC TCGGTGTTCG AGACGCCGGA CGGCTTCGAG
AAACTGCCCG CTTCCGGTGA GGTCCCGCCG GCAGGAACCA TTAACATGAT GCTCTTCATC
AACAAACCGC TGGTACCGGG GGCCATGGCC AGGGTGATCG TGACCGCCAC CGAGGCGAAG
AGCGCCGTGC TGCAGGAGCT GGCGGTGCAT TCGCTCTACT CCGACGGCCT GGCCACCGGC
ACCGGCACCG ATCAGATCGC CGTCTGCGCG GCCCAGACAG GCGGGCCGCC TCTGACCAGC
GCCGGAAAGC ACTCAAAACT GGGGGAGCTG ATCGGCCGGG CGGTGCATGG CGCGGTCAAG
GGGACCCTGG CGCTGCAGAA CGGATTGACT CCGGCCGGTC AGTGCTCGTC CGTGATCCAC
CTGAGGCGCT TCGGCATGGA TCGCGCCGAG ATCCAGGATG CCATCTGCTC CTTTCTGACA
CCGGAACAGG CCGGGCTGTT GCGGCACAGC TTCATGCCCA TCGAGCGTGA TCCGGCCACG
GTGGCGGCGG TCGCCGCCCT GGCGCATCTC AAGGACAAGT TCAGCTGGGG GGTGCTCCCC
GCCGGCTGCT GGAAAGAGGT GATCAGCGCC GCCGCGGCCC AGGTGGCCTG CGCGGTGAGC
GGCAACCACG GCCGCATGCC GGCCTATATG GGGACCCTGT CAGCCTTTGC CGACGGTGAT
TTCCCGGTGC TTGCCTGCCG TGCCCTGGCA TTGGGGTTTG AGGAGAAATG GCATGAAACG
GAACGTACGG ATGATTGA
|
|---|
| Protein sequence | MLIETCYDGV EIHREDRIIY ARFLLPHQVL STCRAAGGMR DDLEYVYNHQ SCEPSGHHHG
VAMKLAREPE RYRKLICDRH GLPHDVCATL GTAANMKNAC IETARFRDIS VVVVCTGGVE
GNAGRAGDPA SVFETPDGFE KLPASGEVPP AGTINMMLFI NKPLVPGAMA RVIVTATEAK
SAVLQELAVH SLYSDGLATG TGTDQIAVCA AQTGGPPLTS AGKHSKLGEL IGRAVHGAVK
GTLALQNGLT PAGQCSSVIH LRRFGMDRAE IQDAICSFLT PEQAGLLRHS FMPIERDPAT
VAAVAALAHL KDKFSWGVLP AGCWKEVISA AAAQVACAVS GNHGRMPAYM GTLSAFADGD
FPVLACRALA LGFEEKWHET ERTDD
|
|---|
| |