| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1235 |
|---|
| Symbol | |
|---|
| ID | 4574121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1292903 |
|---|
| End bp | 1293625 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639755275 |
|---|
| Product | transporter-like protein |
|---|
| Protein accession | YP_900914 |
|---|
| Protein GI | 118579664 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4827] Predicted transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGA ACATCATCCT CTGGATCGGC GGCATGCTCT TCAGCCTGGG GATCTTCGCC
CTCAAGGTCG GCCTAGGCCT TGGCTACGGC AGGGTCGGAA GGCGGGGGAT CGCCCTGACA
CTGGGGGGCT ATATGGGGCT GTTCATGCTG ATCGCCGTCG CGGCGGAACG GCTGATGCGG
ATCCTTCAGC CGATCCTGGC CAAGGGCCCC TGGCTGCACA CCCTGCTGGC GACCGGCATG
ATCGCCTGGG GCATGGTGGT CATCTTCGGC AAACGCCATG AACACCAGGC CGCCGATTGC
TGCGAACGTC CCCCTAGGGC GCGTCTGCTG ATGCTGGTCC CCTGCCCGGT CTGCCTGACC
GCCATGACCT TCTCCATCTG GGCCGCACTG AACGCGATCA AGCTGCCGCC GCTCCTCACC
GGGCTCTGCC TGGGGAGCGC CTTCGCCCTC ATGGCACTGC TGGTGGCGCT CATCGCCCGG
CCGCGTTCCG CAGGGGCATC GGAGACATCC CTGGGCATGG CCATGATCGT GGTCGGCCTC
TACTTCATCG CCTCGCTGTT CCTCCCGGCC AAGATCGAGG CGGCCCGGGG GATGTACAGC
TCGTTCATCA GCGAAAACCG CATTGCCCAG AGTACCGATG CCACAGGCGT TATGATCTTC
ATCCTGCTCC TGGCCCTGGC CGGCTACCTG GCAGGCAGGG GCGGGAAGGG CGAAAGGGGA
TAA
|
|---|
| Protein sequence | MNLNIILWIG GMLFSLGIFA LKVGLGLGYG RVGRRGIALT LGGYMGLFML IAVAAERLMR
ILQPILAKGP WLHTLLATGM IAWGMVVIFG KRHEHQAADC CERPPRARLL MLVPCPVCLT
AMTFSIWAAL NAIKLPPLLT GLCLGSAFAL MALLVALIAR PRSAGASETS LGMAMIVVGL
YFIASLFLPA KIEAARGMYS SFISENRIAQ STDATGVMIF ILLLALAGYL AGRGGKGERG
|
|---|
| |