| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1232 |
|---|
| Symbol | |
|---|
| ID | 4574118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1287599 |
|---|
| End bp | 1291621 |
|---|
| Gene Length | 4023 bp |
|---|
| Protein Length | 1340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639755272 |
|---|
| Product | cobaltochelatase |
|---|
| Protein accession | YP_900911 |
|---|
| Protein GI | 118579661 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCCGA ATAGGCTTTC TCCCCGTTTC CTGTTCTCTG CCGTTCTCGC TGTCTTCGTA
TCGTCACTGC TTATCCTTAC CCCATCTTCC GATGCAACGC CTTCGAAAAC CGGCGTGCAC
CTGATGATGG GCGACTTCAA CTCCAAAACC AGCATCGAAG CGGTCAAGAC CATTCGCGCC
CGCTTTCCCC AGCAGAGCCT CGGCCTGGAT TTCCGGATCA TTACCGGCAA GAGGGGAGAA
AAACTGGACC GGAGCCTGGC CCGCCAGGCA GCCCCCGCCG CGGCGTCCGG CATCGGCATC
ATCCACATCA TGGACCGCCG CCTGGTGGAA GGGCTGAAGC CGCACCTCAT GGATCTGATC
GCCCAGGGGG TGCGCGTCTA TGCGGTGGGA GGCAACTACG GCAAGGAAGA CCAGCAGTTG
GGGCTAATCA ACGACGAGAA GGTGAACGCC TACTACCGTG AGAACGGCGT GGAAAACATG
ACCCAGCTGC TGCTGTTCCT GCTCAAACGG GATTGCGGCC AGAGCGTGGA GTATCGCGAA
CCGTACCGGG TTCCCCAGCA GGGATATTAT CTGCGGGATG GCCACCGGGT CGTGGGCAGT
TTTGAGGAGT ACCGGCGCCT GTACCGCTCC CGGCCCGGTC CCTGGGTCGG CATCCCCTTC
TTCAAGACGC ATCTCGATTC CGGCGAGATG CAGTTGGTGG ACGCCATTGT GGATCGGCTG
GAGGCCCGGG GAATGAACGC CATCCCGATT TTCGGCTTTC CCTCGGAAGT GGCCGTGGAG
CGGTTTCTGA TGGACAGGGA GGGCAAGAGC CGGGTCCAGG CGGTGATCGG CGTTTCCCTC
AAGGTGGGCA TGTCGCCCCA GCGCGCCATC CCGATCCTCT CCAGGCTGGG AGTGCCGGTG
ATCGACGCCA TCACCCTCAT GTCCCAGTCC CGGGAGGAAT GGGAGAAATC CCCGGTGGGG
CTGGACATCT TCGAGCGCTC TTCCAGCGTG GGACTGCCGG AGCTGGCCGG CATCATCCAG
CCCACGGTGG TGGCCTCCCG GGAAAAGGTG GTTGATCAGG AGAGCGGCCT GGAATACGTG
ACCACCACGC CGATCCCGGA GCGCATCGAG CGGCTGGTGG ACCGGGTCAA GGCCTGGATC
AACCTCCAGA CAAAGAACAA CAGGGACAAG AAGATCGCCC TGATCTATTA CAGCTACCCG
CCGGGGAAGC AGGGGATCGG CGCCGCCTAC CTGAACGTGC TGCCGGACAG CCTGTACGAG
ATCCTCAACC GGATGAAGGC CGAGGGGTAC GACACTGGTC GGGATGAGCT GACCAAGAAG
CGCATCTACG ACGATGTCAT CGGATACGGC CGCAACGTGG CCAACTGGGC CCCGGCCGAG
ATGGACCGCC TGGCCCGCAG CGGCCGGGCA TTGCTGCTGC CGGTGGAAAC CTACAGGAAG
TGGCTCCGCG AGCTTCCCCC CGCCTTCAGG AAGTCGGTCA CCAGGGACTG GGGAGAGCCG
GAGAAAAACA ACGGCATGAT GACCTGGCGC GACGAAACGG GGAAGGCATT CCTCATCCTT
CCCGGGGTGC GCTACGGCAA CGTGCTGCTC ATGCCCCAGC CGGCCAAGGG GTGGGCGCAG
AACATCGTCA AGGCCTACCA TGACCCCACC ATCGCGCCCC ATCACCAGTA CCTGGCCTAC
TATCTCTGGC TGAAGAAGGG ATTCAGGGCC GATGCCCTGG CCCACATCGG CACCCACGGC
ACCCACGAGT GGATGGGGGG CAAGGAGATC GGCTTTACCA GAGAGGATCC CTCCGAGGTG
CTGATCCAGG ATCTGCCCAA CATCTACCCC TACATCGTGG ATGACGTGGG GGAAGGGATC
CAGGCCAAGC GCCGCGGCAT GGCGGTGGTG GTGGACTACA TGACCCCTCC CTTCGACAAG
GCCGGCATGA ACCGCGACCT GAAAGAACTG GCGGCCCTGA TCAGCGATTA CAACAACGCC
CGGGAGAAAT CGCCCCAATT GGCGGCCTCC AAGCTGGAGG AGGTCAACCG CATCGCCGGG
AAGAGCGGCA TGCTGACCGA CCTGAAACTG AAGGCCATCG CCACCCATGA CGACGTGGAA
GAGCTTGAGC ACCACATAAA GGATATCGCC GAGACCACCA CCCCCTTCGG CCTGCACACC
TTCGGAAAAT CGCCCGAGGA GAGGTACATC CGCAGCACGG CCGAGGCCAT CATCTCCATT
GAGAAGGGGC TCGACCCCGC TGCACGGGCA AAGAGAATCG CGGCGCTGGA AGACGCCATC
CGTCGCAGTG GCCCGCGGGA GCTGGACTCG TTCATCAATG CCTTAAACGG CAGGTACATC
CCGGCCGGCA CCGGCAACGA CCCGATCCGC AACCCGGATT CCCTCCCCAC CGGCAAGAAC
TTCTACTCCT TCGACCCGGC CCGGGTCCCC TCCCCCGCCA CCTACGCCAC TGGCGTCAAA
CTGGCGGGGG AACTGATCGA GAACTACCGC GCACGCCACG GTGTCTACCC GGACAAGCTT
TCCTTTGTTC TCTGGGCCAC GGAGTGTATC CGCCACGAGG GGGTGATGGA GTCCCAGGTC
ATGTACCTGA TGGGGGTGCG TCCGGTGTGG GACGAGCGGG GCAGGGTCCA GGGGGTGGAG
GCCATCCCCC GCGCCGAGCT GGGCAGGCCG CGCATCGACG TGACCATGAC CCCCTCGGGG
CTGTACCGCG ACCTGTTTTC GGGGCTGATG GACCTCTTGG ACAAAGCGGT CTCCGTTGCC
AGGGACCAGA AGGAACAGGA TAACGTCGTC CGCGCCAACA CCCTCACCAC CCAGAAGATG
CTGATGAAAA AAGGGGTGCC GGAGGAGACC GCCCGCCGCA TGGCTTCGGT GCGCATCTTC
ACCGAACCCT CCGGGGCCTA CGGCAACGGC CTGGAAAACG CCATCGTGGC CTCCAACACC
TGGGACAACG AGAAGAAGGT CATCGACGTC TATTTCCGGC GGGTCGGCTA CCTGTACGGC
CAGGGGTTCT GGAGCGAAGG GGGTAAACAG GGGGGTGAGG AGCTGGGCCA GGTGCTGTTG
AAAAACGCCC TTTCAGGAAG CAAGATTGCC ATCCACAGCC GCTCCACCAA CACCATCGGC
GTGTTGGATA CGGACGACTT CTACCAGTAT CTGGGCGGCC TGGCCATGGC CATCCGCGCC
GTGGACGGAA AAACGCCGGA GGTGTTCGTC AGCAACATGA CCAACCCCAC ACAGGCCCAC
CAGGAGACCC TGGAGAAAAA CATGGGGCGG GAGATGCGTG CCCGCTACCT GAACCCGGAG
TGGATCAAGG CCATGATGAA GGAGGGCTAC GCCGGCGCGC GCTTCATCGA CAAAGTCACC
GAGCACCTGT GGGGGTGGCA GGTGACGGTG CCCGAGGCGG TGGACAAGGC CAAGTGGCAG
GAGATGTATG AAACCTACGT CCAGGACAAG AACGGCCTGG GGATGAAGGA GATGTTCCGG
AAGTCAAACA ACATGTGGGC CTACCAGTCC GTGGTGGCGC GCATGCTGGA GACCGCCCGC
AAGGAGTACT GGAAACCGGA CCGGAAGGTG ATCGAGAAGC TGGCCGAGGA GTACGCCAAA
ACCGCCGCAG AGGTGGGCAT GGCCTGCTGC GACCACACCT GCAACAATCC GCATCTGACG
AAATTCACCT CATCGACCCT GCTGTCCGTG CCGGGGCTCG CCCCCCTGAA CAGCGGCTTC
GTCCGGGCGC TGAACGACAT GAAGCAGGTG GGCTCCAACC CGGCCGCGGC CCGGCCGGCA
CAGGCCCGCC AGGGGCGCGC GGCGGGAGCG AAAACATCCG CCAGGGGCGC CTCCGGCCGC
GCGCCGGACG GCAGCGGCAA GGGGGCCACG GGAACCCAGG TTGCAGGCTT CGAGGTGGAA
GAGGTAAAGA GCGGCGCGGC CGCCGGTGGC GCCTCGTCCG CCCCCATCCC CTGGATGTTC
ATGGTCGGTT TCGCCATCTT CATCACCCTG GTGGCCTGGG GCTTCCGGAA GGGAGGAGCG
TAA
|
|---|
| Protein sequence | MFPNRLSPRF LFSAVLAVFV SSLLILTPSS DATPSKTGVH LMMGDFNSKT SIEAVKTIRA
RFPQQSLGLD FRIITGKRGE KLDRSLARQA APAAASGIGI IHIMDRRLVE GLKPHLMDLI
AQGVRVYAVG GNYGKEDQQL GLINDEKVNA YYRENGVENM TQLLLFLLKR DCGQSVEYRE
PYRVPQQGYY LRDGHRVVGS FEEYRRLYRS RPGPWVGIPF FKTHLDSGEM QLVDAIVDRL
EARGMNAIPI FGFPSEVAVE RFLMDREGKS RVQAVIGVSL KVGMSPQRAI PILSRLGVPV
IDAITLMSQS REEWEKSPVG LDIFERSSSV GLPELAGIIQ PTVVASREKV VDQESGLEYV
TTTPIPERIE RLVDRVKAWI NLQTKNNRDK KIALIYYSYP PGKQGIGAAY LNVLPDSLYE
ILNRMKAEGY DTGRDELTKK RIYDDVIGYG RNVANWAPAE MDRLARSGRA LLLPVETYRK
WLRELPPAFR KSVTRDWGEP EKNNGMMTWR DETGKAFLIL PGVRYGNVLL MPQPAKGWAQ
NIVKAYHDPT IAPHHQYLAY YLWLKKGFRA DALAHIGTHG THEWMGGKEI GFTREDPSEV
LIQDLPNIYP YIVDDVGEGI QAKRRGMAVV VDYMTPPFDK AGMNRDLKEL AALISDYNNA
REKSPQLAAS KLEEVNRIAG KSGMLTDLKL KAIATHDDVE ELEHHIKDIA ETTTPFGLHT
FGKSPEERYI RSTAEAIISI EKGLDPAARA KRIAALEDAI RRSGPRELDS FINALNGRYI
PAGTGNDPIR NPDSLPTGKN FYSFDPARVP SPATYATGVK LAGELIENYR ARHGVYPDKL
SFVLWATECI RHEGVMESQV MYLMGVRPVW DERGRVQGVE AIPRAELGRP RIDVTMTPSG
LYRDLFSGLM DLLDKAVSVA RDQKEQDNVV RANTLTTQKM LMKKGVPEET ARRMASVRIF
TEPSGAYGNG LENAIVASNT WDNEKKVIDV YFRRVGYLYG QGFWSEGGKQ GGEELGQVLL
KNALSGSKIA IHSRSTNTIG VLDTDDFYQY LGGLAMAIRA VDGKTPEVFV SNMTNPTQAH
QETLEKNMGR EMRARYLNPE WIKAMMKEGY AGARFIDKVT EHLWGWQVTV PEAVDKAKWQ
EMYETYVQDK NGLGMKEMFR KSNNMWAYQS VVARMLETAR KEYWKPDRKV IEKLAEEYAK
TAAEVGMACC DHTCNNPHLT KFTSSTLLSV PGLAPLNSGF VRALNDMKQV GSNPAAARPA
QARQGRAAGA KTSARGASGR APDGSGKGAT GTQVAGFEVE EVKSGAAAGG ASSAPIPWMF
MVGFAIFITL VAWGFRKGGA
|
|---|
| |