Gene Ppro_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1171 
Symbol 
ID4571520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1222686 
End bp1224269 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content64% 
IMG OID639755208 
Producthistidine kinase 
Protein accessionYP_900851 
Protein GI118579601 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00415214 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTGG TTCTGCTGGT CTGCGCCCAG GTGAACAGGC TGGAACGGAG CGCACACGAA 
CTGCGCGAAG CCCAGGATGA CTGGGAGGCC TCCTTCAATA CCATTACCGA TGGCATCCTG
CTGGAGGATG CCGGGGGGGC GGTGATCAGG ATGAACCAGG CCGCCCGGAG CATGCAGGGG
GCACGTCTGC TGGAACAGCT TGCTCGTGCT CCCCTGTCCG GCTGCGGGGA GGAAATGGGC
GATCAGGGCC GTACCCGTGA GTTCGTTGAC CCGCTTTCCG GCAACTGCTA CGAGATCAGG
TCGCGTGCCC GCTCCGACCA TCCGCGGGGG GGGGGTGGGG TTGTGCATGT CATCCGGGAT
GTGACGGCCA GGAAAAAGAT GGAGAAGGAG AAGGAGTTGC TCCAGTTCCA GTTTCTCCAG
GCCCAGAAGA TGGAGTCCGT CGGCCGGCTA GCGGGTGGCG TGGCCCATGA CTTCAACAAC
ATACTGACCG CCATACTGGG CTACAGCGAG ATTGCCCGCC TGAGGGCCGC CCATGACGAG
AAGCTTGCTG AGTGCCTGGA TATTATCCAT GACTCGGGCA TGAAGGCGGC ATCCCTTGTC
CGGCAGCTGT TGATCTTCAG CCGCAAGAGT ACGCTGGAGC CGCAGGTGGT TGATATCAGG
TCGCTCATCG ACAACATGGC CAAGATCCTG GCGCGGGTGA TCGGAGAGGA CGTCATCCTC
GGGCTGCAGA CCGAATCGCC GGTCGGGAAT ATACTCGTTG ACCCGGCCCA GGTCGAGCAG
ATCATCATGA ACCTGGTGGT CAACGCCCGG GACGCCATGC CCCAGGGCGG GACGGTGACC
ATCCGGGCCG AGGATGTGGA ACTGGACAGC TCCTACACCT GCAGCCATCT GGACCTTGTC
CCCGGTCCCT ATGTGATGCT CTCGGTGAGG GATACCGGCA TGGGTATGAG CCCGGAGGTG
CGGGCGCGGA TCTTCGAACC CTTCTTCACC ACCAAGGAGG TGGGGGAGGG GACCGGCCTG
GGATTGTCAA CGGTCTACGG AATTGTCAGG CAGATGGCGG GACACATCTA CGTCTACAGC
GAGCCGGGCA GGGGAAGCGA GTTCAAGGTG TATTTTCCGG TTTGCCGGGA GAACGTCGCC
GCGGTTGGGC CGGAGGTGGA GAAAACCGTA GCCGGCGGCA GCGAGACGAT CCTGGTCGTG
GAGGACGATG CCTCGATCCT GACCCTGATC GCCTCCCTGC TGGAGCCGCT GGGCTATGCC
GTTCTGGCGG CCCATTCCGG CGACGAGGCC CTGGCGCTGG CGGAGCGGAG CGGAAAACGG
ATCGATCTGC TGCTGACGGA CGTTGTCATG CCGGGAATGG GGGGGAGGAA GCTGGCCGGG
CTGTTCCTTG AAAAACATCC CGCGGCGCGG GTTGTCTTCA TGTCCGGCTA CACCGATGAC
ATCATCATTC GCCAGGGGGT GAGCCAGGGG CAGTGCGCCT TTGTCCAGAA GCCGCTCTCG
CCGCGCTCCC TGGCCAGGAA GCTGCGGGAG GTGCTGGATG GCCAGGGGCG GGAAGGCGCT
GCTCCCCCTG TGCCGGCTGG CTGA
 
Protein sequence
MLLVLLVCAQ VNRLERSAHE LREAQDDWEA SFNTITDGIL LEDAGGAVIR MNQAARSMQG 
ARLLEQLARA PLSGCGEEMG DQGRTREFVD PLSGNCYEIR SRARSDHPRG GGGVVHVIRD
VTARKKMEKE KELLQFQFLQ AQKMESVGRL AGGVAHDFNN ILTAILGYSE IARLRAAHDE
KLAECLDIIH DSGMKAASLV RQLLIFSRKS TLEPQVVDIR SLIDNMAKIL ARVIGEDVIL
GLQTESPVGN ILVDPAQVEQ IIMNLVVNAR DAMPQGGTVT IRAEDVELDS SYTCSHLDLV
PGPYVMLSVR DTGMGMSPEV RARIFEPFFT TKEVGEGTGL GLSTVYGIVR QMAGHIYVYS
EPGRGSEFKV YFPVCRENVA AVGPEVEKTV AGGSETILVV EDDASILTLI ASLLEPLGYA
VLAAHSGDEA LALAERSGKR IDLLLTDVVM PGMGGRKLAG LFLEKHPAAR VVFMSGYTDD
IIIRQGVSQG QCAFVQKPLS PRSLARKLRE VLDGQGREGA APPVPAG