| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1136 |
|---|
| Symbol | |
|---|
| ID | 4571485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1179535 |
|---|
| End bp | 1180617 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639755175 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_900818 |
|---|
| Protein GI | 118579568 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGTCA TGGACAAGCT CAAGGGAGAA TTGATCGACA TTATCCAGTG GCTGGACGAC
ACCCACGACA CCCTGGTGTA CCGTTTCGTA CGCTACGACA ACGAGATCAA GTACGGAGCC
AGGCTGGTGG TGCGCGAAGG GCAGATGGCG GTGCTGATCA GCGAGGGAAA ACTGGCCGAT
GTGTTCCAGC CGGGCACCTA CCGCCTGGAA ACCCGCAACA TGCCACTACT GGCCACCCTG
AAGGGATGGA AATACGGCTT TTCCAGCCCC TTCAAGACCG AGGTCTACTT CTGCAGCACG
CGCCAGTTCA CCAACCTGAA ATGGGGCACC CCCGGACCGG TGACCATGCG CGACCCCGAA
CTGGGCGCGG TACGGGTCAC TGCCTACGGC CTCTATGCCA TCAAACTGAA AGATCCGGCC
CTGTTCATCA GGGAAATCGT CGGCACCAGC GGCGTCTTTT CGACCGCCTC CATCGAGGAT
AACCTGCGGG GCAAGATCGC CAGCCACATC AAGGAGGCAC TGCCCCAGGC GGGCATTGCG
GTGATCGACC TGGAGGGAAA GGTCGTGCTG CTGGGCGAGA CGCTCAGGGA CAGGATCGCC
CCGGCCATGC AGGCCTTCGG GCTGGAGCTT ATCGAGGTGC AGGTGCAGGA CATCGGGCTC
CCGGCCGAGG TGGAGCAGGC CATCGACAAG GCCGGCGCCA TGCGCGTCAT CGGCAACATG
CAGGAATATA CCAGTTATGA GACAGCCAGC GCCATCCGTG ACGCGGCCAA CAATCCGGGC
GGTCTGGCCG CGGCCGGCGT TGCCGCCGGC ATCGGCTTCG GCATGGCCGG ACAGATGGGA
ACAGCAGTGG GCGCGCTCCA GGGCGGAGCA ACCGCCCCGC CTCCCCTGCC CCGCTTCTTC
GTCGCCGTCA ACAACCAGCA GACCGGGCCG TTCGACCGGG CAGACCTTCT CCGCATGTCC
CAGGCCGGCG AACTAACCCG GGAGAGCCTG GTCTGGAAAC AGGGGATGGA GGGATGGACA
AAGGCGGGAC AGCTCCAGGA GCTTGCCGAC CTGTTCGCAC TCCTGCCGCC CCCCCTGCCG
TAA
|
|---|
| Protein sequence | MGVMDKLKGE LIDIIQWLDD THDTLVYRFV RYDNEIKYGA RLVVREGQMA VLISEGKLAD
VFQPGTYRLE TRNMPLLATL KGWKYGFSSP FKTEVYFCST RQFTNLKWGT PGPVTMRDPE
LGAVRVTAYG LYAIKLKDPA LFIREIVGTS GVFSTASIED NLRGKIASHI KEALPQAGIA
VIDLEGKVVL LGETLRDRIA PAMQAFGLEL IEVQVQDIGL PAEVEQAIDK AGAMRVIGNM
QEYTSYETAS AIRDAANNPG GLAAAGVAAG IGFGMAGQMG TAVGALQGGA TAPPPLPRFF
VAVNNQQTGP FDRADLLRMS QAGELTRESL VWKQGMEGWT KAGQLQELAD LFALLPPPLP
|
|---|
| |