Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1129 |
Symbol | |
ID | 4574939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1171098 |
End bp | 1172924 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639755167 |
Product | peptidase C14, caspase catalytic subunit p20 |
Protein accession | YP_900811 |
Protein GI | 118579561 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0156816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGATGG ATCAGGAAAA CGCAGAAAAT CCCAAGGCGC TGTTTGTCGG CATCGGAGTC GGTACCTACG ACCATTTCAA CCCATTACCG AAGGCAATTT CTGAGGTGAA TGACCTTGCC GGGATACTGG AAAACCGCGG CTACAATGTA AAGGTTATTG TTGACCCCGA CACTCCCAAG GGGATTAGTG AACTTAAAAC CGCACTTCCC AAAGAGCACT TCGGTCGTGG CGGGTCTCTC GTTGTTCTCT GGTCAGGCCA TGGAGAGACG ACGCCGGAAG GAGCACTGCA TCTGGTTCCA ACCGATGCTG AACCCGGTGA TGCGCCGCAG CTAACCTCCG ATTACCTGGC AGGCCTTGCT GCACGTACCG GTGCAAACCA GATTATGCTG GTCCTCGATA CCTGCTTTTC GGGTAGCGGC ATAATTGCTG CCGGCACAGT GGTTGATAAG GTGCAACGTG AGCTACCGCC GGGGAATCCG CATGTGTGGG TGGGTGTCGT GGCATCGGCC CTGGATTATG AACGATCCAA GGATGGCGTG TTTGGCGCCA GGCTCCTCAA ACTCCTTAAA CATGGCCCCG ACAACCCCCA CGATCCTGAT CTCTGTTTTC GCTGGAGTTC AAAAAACAAA GGAGTAATCG GAACAGACCT GCTCTTTACT CTGCGCAAGG AATGGGACAT TCAGGGGCAA TGTCCCAAAA CGACGGAAAC CAGTACTGCC AATTGCCAGA TGCAGTTTCC AAACCCGCTT CACAACCCGG ATGCGCCAGA CCGTGTAGTG GAACACCTCC TCCTGGCTGC CCGTGGCGTG GCCCCCAACG AAGAAGGGTT TTTCTTTACC GGTCGAACTG CCCAAATTAA TCAAATCGTG AGTTGGATGC AGGCCGGCAA ACCCGGCATA TTCGTAGTGA CTGGTCCCGC CGGCAGCGGT AAGTCGGCCA TTGTCGGCCG TGTCGTAAGC CTTTCCAACC CGGAGGAACG TCAGTATATT CTCTCGCCTA CAGGGCTTGA ACATGCGGAC CCCGGCGAAG GTTCGGTACA TGCCCATGTT CATGCCAGGG GAGTGACCGT GGAGCAGTTA TGTCAGCTCG TCGATGATCA GCTTGTCCGC AGAAATCTTT TACCGGAAAA TCCGGGGGGA TCCCGCAACA AATGGGAGTT GCTGGGTGCA ATTGAGCGCT GCCCATGCCG GCTGATGATT GTTGTCGACG GGCTCGATGA GGGCGGTCCC GAAGCCATAA AAATTGCCCA GGAGTTTTTG CGCCTCCTGT CACAGAAATG TCTTGTGCTA GTGAGCAGCC GTGAAGTAGC GCACGAGGAG GAGCTTTCCC TTCTCCAGTC GCTGGGGCCA TGCGAGACCA TCGATCTGGG AACGGATATG GTACAGGCAG AGACGAAAAC AGCGGTCCAT GATTATGTAA AGAAACGTTT GGCTGATTGC TCCGGGAAGA TGGATGCAAC AAAAATTGGA GATGCGATCA TCCGGATCTC CGAACAGCAA GGAGAAGGCA CCTTTCTGCT GGCGCGGGTA ATAACCACAC AACTCCGGAA TAATCCAGTG GATACATCTC GTATCAACTG GGAAGGCAAT TTGGACAAAA GTATCGAGGA CGCCTTTGAT CGCGAACTGA CCGCGATCCC CTCTCTGCTG CGTGATGGAA TCGAGTTGCC TCATGCAGCG CGGGAGTTGC TGACTGCCCT GGCTTGGGGG TATGGAGCCG GCCTAACCGA TGATGTCTGG CCGATCGTGG CAACGGCACT TTCTTCCACT GGGGCAACAT ACCTGAGGGA AGATGTTTTC TGGCTCCTAG GAGTCTGTCG GGCTTGA
|
Protein sequence | MMMDQENAEN PKALFVGIGV GTYDHFNPLP KAISEVNDLA GILENRGYNV KVIVDPDTPK GISELKTALP KEHFGRGGSL VVLWSGHGET TPEGALHLVP TDAEPGDAPQ LTSDYLAGLA ARTGANQIML VLDTCFSGSG IIAAGTVVDK VQRELPPGNP HVWVGVVASA LDYERSKDGV FGARLLKLLK HGPDNPHDPD LCFRWSSKNK GVIGTDLLFT LRKEWDIQGQ CPKTTETSTA NCQMQFPNPL HNPDAPDRVV EHLLLAARGV APNEEGFFFT GRTAQINQIV SWMQAGKPGI FVVTGPAGSG KSAIVGRVVS LSNPEERQYI LSPTGLEHAD PGEGSVHAHV HARGVTVEQL CQLVDDQLVR RNLLPENPGG SRNKWELLGA IERCPCRLMI VVDGLDEGGP EAIKIAQEFL RLLSQKCLVL VSSREVAHEE ELSLLQSLGP CETIDLGTDM VQAETKTAVH DYVKKRLADC SGKMDATKIG DAIIRISEQQ GEGTFLLARV ITTQLRNNPV DTSRINWEGN LDKSIEDAFD RELTAIPSLL RDGIELPHAA RELLTALAWG YGAGLTDDVW PIVATALSST GATYLREDVF WLLGVCRA
|
| |