| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1095 |
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| Symbol | trmD |
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| ID | 4573737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 1143570 |
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| End bp | 1144316 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639755134 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_900778 |
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| Protein GI | 118579528 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0931824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTTCG ACATACTGAC CCTCTTTCCC GGCATGTTCC GCGGCCCCTT CGACGAGAGC
ATCATCAGGC GGGCCAGGGA AAAACAGCTC ATTGACATCA GCCTGCACAA CATCCGTGAC
TATGCCCTGG ATCGGCACCA GGTAACGGAC GATGCTCCCT ACGGAGGGGG CGCCGGCATG
GTGATGAAGG TTGAACCGCT CTCCGCCTGC ATCCAGGCCG TGAAGACTCT TCGCCCCGCA
TCCACCGTGG TGATGACCTC CCCCCAGGGG CGCCCCCTCA GTCATGGGGT TGCCCAGGAA
CTAAGCCGGC GTCAGGGAAT GATTATCATC TGCGGACGCT ACGAGGGGGT TGACGAACGC
ATCCGTGACC TGTACGTGGA AGACGACATC TCCCTGGGAG ACTTTGTCCT CTCCGGCGGA
GAAATCGCCG CCATGGCCAT CGTGGACGCG GTCACGCGCC TGATTCCGGG CGCGCTGGGG
TGCGACGAAT CGGCTGCGAC CGACTCGTTC TGCGACGGTC TCCTGGAATA TCCACAGTAT
ACGCGGCCGC CTGAGTTCAT GGGGTTGTCG GTGCCGGAGA TACTGCTGTC GGGAAATCAC
GAGCTGATCA GGAAGTGGCG GCGCGCGCAA TCCCTGGGGA AGACTGCCAG ATTGCGGCCA
GACCTGCTTG CCAAAGTCGC GCTTAATGAC GAGGACCGCA GGCTTCTTAA GGGACTGGAA
CAAGAACATG GCTCAGCCGT CCGCTAA
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| Protein sequence | MIFDILTLFP GMFRGPFDES IIRRAREKQL IDISLHNIRD YALDRHQVTD DAPYGGGAGM
VMKVEPLSAC IQAVKTLRPA STVVMTSPQG RPLSHGVAQE LSRRQGMIII CGRYEGVDER
IRDLYVEDDI SLGDFVLSGG EIAAMAIVDA VTRLIPGALG CDESAATDSF CDGLLEYPQY
TRPPEFMGLS VPEILLSGNH ELIRKWRRAQ SLGKTARLRP DLLAKVALND EDRRLLKGLE
QEHGSAVR
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