Gene Ppro_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1092 
SymbolrnhB 
ID4573734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp1141921 
End bp1142580 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content64% 
IMG OID639755131 
Productribonuclease HII 
Protein accessionYP_900775 
Protein GI118579525 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.11848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACCCA TGCAACAGCG CGAACTCTTC AGCTCGCCCC CCATTGACCT GCTGTTCTTC 
GAGCAGCAGG CTCTTAAACA GGGGCACAGG GTCATAGCGG GAATCGACGA AGCCGGCAGG 
GGCGCGCTCT GCGGTCCGGT GGTGGCAGCG GCCGTGATTC TTCCCACAGG TATGGCCATT 
CCGGGCGTGG ATGACTCCAA GAAGCTCTCG CCCCGCACAC GCGAGCAGCT TTTCGACGAG 
ATAATGGCTC GGGCGCTTTC CGTCGGCATC GGTATCGGCA CGCCCCAATT GATCGATCGC 
ATCAATATTC TCCAGGCCAC GCGCCATGCC ATGGCGGAGG CCGTAGACAT TCTTGCCCCG 
CGACCGGACA TGCTGCTGAT CGACGGCATC AGTACCATCG ACGTCCCGCT CCCCCAGAAG 
ACCATCACCA AGGGGGATTC GCGCTCCCTC ACCATCGCGG CAGCATCCAT CATCGCCAAG 
GTCAGCCGTG ACCGCATGCT GACCGAACTG GACCTACTGC ATCCCGGCTA CGGCTTCGCC 
AGCCACAAGG GGTACGGCTG CGCCTCGCAC ATGGAGGCCA TCCGCCGGCT GGGCCCGTCC 
CCGGTCCACC GTCTGACCTT CCGGGGCGTA CGGGAGCACG TGACGTGTCC CTCTTCCTGA
 
Protein sequence
MSPMQQRELF SSPPIDLLFF EQQALKQGHR VIAGIDEAGR GALCGPVVAA AVILPTGMAI 
PGVDDSKKLS PRTREQLFDE IMARALSVGI GIGTPQLIDR INILQATRHA MAEAVDILAP 
RPDMLLIDGI STIDVPLPQK TITKGDSRSL TIAAASIIAK VSRDRMLTEL DLLHPGYGFA 
SHKGYGCASH MEAIRRLGPS PVHRLTFRGV REHVTCPSS