Gene Ppro_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1090 
Symbol 
ID4573732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1139746 
End bp1140741 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content64% 
IMG OID639755129 
Productaminodeoxychorismate lyase 
Protein accessionYP_900773 
Protein GI118579523 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCAC CCGGCCGCCG TACCACACGT TTGATTGCCT CGCTCATTGG CTGCTGCCTG 
CTCTTTCTGC TGGCCTGGTA CCTGGTCTGC CTGCTGATAC CCGTCGGCAG GGGCAGAGTG
GTGCGGGTGG TGTCGTTGCC GGCGGGCAGC GGTGTCGCTA AACTGGCCCA GGATCTGAAG
CAGGGCGGTA TCATCCGCAG TTCCTGGCAT TTCATCCTGG TCAGCCGTCT GCGGGGGCAG
GTCCAGCGCC TGAAGGCAGG GGAGTACCGC TTCAACGATG CCATGACCAC AACGGAGATA
CTGCTCAAGG TGGTGGAAGG TCGCGTCGAT TTCCGGCGCT TCACCCTTCC CGAAGGGTAT
TCCATCTATC AGGCTGCCGA ACTGCTGGAA CGGAAGGGGC TTCTGGGGCG GGATGATTTT
CTGGATGCCT GCCGTGATCC ACTGTTACTG GCCAGGTTGG GCATCGGGAC TGAGAGTGTG
GAGGGGTACC TCTTTCCCGC CACCTACAAC CTCTCCCGGG GGGAAAGCGC CAGCCAGCTG
GTTTCCCGCA TGACGGCCCA GTTCGAGAAA AACTACGCCG CCATGGCCGG CAGAGCCGCC
GGAGCCAGAT CCCGACACGC GGTGGTGACC ATGGCCTCCA TGATCGAGAA GGAGGCCGTA
TCCCCCATCG AGAAGCCGCT GATCTCCTCG GTCTTCCACA ACCGTCTGGC CATGGGAATG
CGCCTGCAGA GCGATCCAAC GGCGGTGTAC GGCGTGCGGG CCTTCGGCGG CACGGTGAGC
AGTGCCGACA TCCGTCGCCC CTCCCCCTAC AATACCTACC TGAACCGGGG GCTGCCGCCC
GGCCCCATCG GTAATCCGGG CGCCGATGCC TTGGCTGCCG CCCTCCATCC CGCGGCAACC
CCGTACCTCT ACTTTGTGGC ACGCCAGGAC GGCACCCACC ATTTCTCCCG CACCCTGGAC
GAGCACAACC GCGCGGTCCG GCGGTATCTT AAATAG
 
Protein sequence
MIAPGRRTTR LIASLIGCCL LFLLAWYLVC LLIPVGRGRV VRVVSLPAGS GVAKLAQDLK 
QGGIIRSSWH FILVSRLRGQ VQRLKAGEYR FNDAMTTTEI LLKVVEGRVD FRRFTLPEGY
SIYQAAELLE RKGLLGRDDF LDACRDPLLL ARLGIGTESV EGYLFPATYN LSRGESASQL
VSRMTAQFEK NYAAMAGRAA GARSRHAVVT MASMIEKEAV SPIEKPLISS VFHNRLAMGM
RLQSDPTAVY GVRAFGGTVS SADIRRPSPY NTYLNRGLPP GPIGNPGADA LAAALHPAAT
PYLYFVARQD GTHHFSRTLD EHNRAVRRYL K