| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1078 |
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| Symbol | |
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| ID | 4575044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 1128462 |
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| End bp | 1129733 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639755117 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_900761 |
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| Protein GI | 118579511 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.327406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATA TTTTACGTTT TTTTGTTCTA ATGCTGGTCG TCTCGCTGCT CTGCGGTTTT
CTCTCGGGCG CTGGTGGCGA CGAACGGTTG CGTCGTGGGG ATGAATATCT GCAGGCGCGT
CAGTGGGAGG AGGCAATCGA CGAGTATCGA GCGGCACTCT CGGAGCGCCC GGAGTGGCCG
GCGGCCCTGG AGCGGCTTGC CGATGCCCTG ATGGCCGCCG GAAAGGACGG GGAGGCAATC
AGCACCTATG AACGCCTCCT GCGTCTGGAT GAGTCGCGGG GATCGGTGCG CTACACGCTG
GGGGTCCTCC ATGAACGTGG TGGTCGCTTG AAGGAGGCCG AGAGTCAGTA TCGCGAGTGC
CTGCGGCAGG AACCGGACAA CGATGATGCG CGGCGCCACC TGGCAGATAT CTATGTTCTG
CGCGGCAATC TCACCCTGGC AACGAAAGAG TACCGACAGC TCATCACGCG GCAGCCGGCT
AACCCGCTAT TTTACTTCAG GCTGGCCAGG GTTCTGAAGA AGAATCGCAG GTACGGTGAG
GCCATCAAGG AGTACCGCCG GGCCATCGAA CTGGCCCCCC ACAACGCCGA ACTGCGTCGA
GAGTTGGCGG AGCTTTACTG CAAAAGGGGG ATGGGGGACG GCGCGATCGG CCAGTACCGC
GAACTGCTGC GGCTGGACAA CAGGGATACG GAAGCGCGCA ACTCTCTGAT CTCTCTCTAC
GTCAAGCTGC ACCGGTACGG AGCCCTGCGC CAACTGTTGC AGGAGGGGGT GGAACGGTTT
CCTGACGACC CCGACAGCCA CTTCAGGATG GGGCTGATGC ACGACTTCGC CCGGGAGTAT
CAGGCGGCCA TTTCCGAGTA CCGCAAGGCC CTGGCGCTTA AGAACGACCA TGCCAGGGCT
TTGAAGGGGC TGGGGAAAAT CTACCTGAAG CTCGGCAAAA CGACCAAGGC CAAGGAGTGT
CTGGTGGCTG CGCGCAAGGC GGATCCGGAC CTGCAGGAGG CACAGGAACT CCTGAACAGC
CTGCGGGAAC GCCCTGTGGT GAAGAAGAGC CGGAAAAATT CCAGGAAGAG CACGCTCCAG
CGGAGTACGA AAAAGAAGTA CCGTTCGTCG CGAACGAGCA GGCGTTCCAA AGTCTCCTCC
GTGAAGTCCA AGAAGTCCAA AAAGTCAAGG AAGTCTACAG AGGTCAAGAA GTCCAAGAAG
TCAAGGAAGT CTACAGAGGT CAAGAAGATC GGGAAGAAGC GGAACAGCGG TTCATCCGGG
GCGAAACGCT GA
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| Protein sequence | MINILRFFVL MLVVSLLCGF LSGAGGDERL RRGDEYLQAR QWEEAIDEYR AALSERPEWP
AALERLADAL MAAGKDGEAI STYERLLRLD ESRGSVRYTL GVLHERGGRL KEAESQYREC
LRQEPDNDDA RRHLADIYVL RGNLTLATKE YRQLITRQPA NPLFYFRLAR VLKKNRRYGE
AIKEYRRAIE LAPHNAELRR ELAELYCKRG MGDGAIGQYR ELLRLDNRDT EARNSLISLY
VKLHRYGALR QLLQEGVERF PDDPDSHFRM GLMHDFAREY QAAISEYRKA LALKNDHARA
LKGLGKIYLK LGKTTKAKEC LVAARKADPD LQEAQELLNS LRERPVVKKS RKNSRKSTLQ
RSTKKKYRSS RTSRRSKVSS VKSKKSKKSR KSTEVKKSKK SRKSTEVKKI GKKRNSGSSG
AKR
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