Gene Ppro_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1062 
Symbol 
ID4575165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1112040 
End bp1113338 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content64% 
IMG OID639755101 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_900745 
Protein GI118579495 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGCT CCGGCGGAAT GCCGCTCCGG GAAGAAGCCA GCCATATGAA CAGAATCCTG 
CACATACTCG TCTGCCTGCT GCTGACCTGC CTGCTGCCAC TGCATAGCCA GGCCGCCAGG
AAGAGCCAGA CCGCCTTCAC GTCACAGAGT TCCGCCACCC GGCGCCCCCT GGCCGTCCTG
AACGACATCA AGCACTGGTC TACCCCCGAC TACACCCGCG TTTCAATAGA ACTGGACCAG
GACGTGGTCT GGGAAGCCCA TGAACTGGGC AAGGGGGGCA ACGGCAAACA GGGCAGGATC
TTCATCGACA TCAAACGCAG CAGGCTGGCC ATGGGGATCA AAAACATCAC CATCGGCGAC
GGCCTGCTGA AGGGAGTGCG CGTGGCCCAG TACCGGCCAG AGGTGGTGCG GGTGGTGCTG
GACACGCAGA ATATCAAGAG CTACAAGGTA TTTCCCCTCT CCACCCCGGC GCGCCTGGTG
ATCGATGTGC GCGGCGAACG CCCCACCGAG ATTTCCCGCA TGGAGCAGAC ACTCAGCACG
CCCCCCGCCC CGACAGCGGA GCCCGGACGC AGCGAAGTGG CGGCGGTAAC GAAGCGAACA
AAGTCGCCGC GCAAGGTCAG CCACTCCAAG ATTCGCCGCA TCGTGCTGGA TCCCGGCCAT
GGGGGCCACG ACCCGGGAGC CGTGGGAGCG GGCGGCACCC AGGAGAAGGA TGTGGTGCTG
GCCATCGGAC TCAAGCTGCG CGAGCTACTT CGGGAGGAAC TGGGGCTGAA TGTGGTCATG
ACCCGCACCA GCGACGTCTT CATCCCCCTG GAGGAGCGCA CCGCCATCGC CAACAAGGTC
AACGCCGACC TGTTCCTCTC GATCCACGCC AATGCCGCCC CCAACCACGC CGCATCGGGC
ATCGAAACCT ACTACCTGAG CCTCGCCAAG ACGGAGAAGG CGGCCCGCCT GGCGGCCAAG
GAAAACGGCA CAACCCTGGA GAAGGTCAGC GTGCTGCAGG CCATCCTGTT CGACCTGATG
GCCAACTACA AGCTGAACGA CTCGGCACAC CTGGCCAACG ACGTGCAGAA GGCGCTGCAC
AAAAAGATCC ACGGACTGCA TGCCGACGTC AGGAACCTGG GGGTCAAGCA GGGCCCCTTC
TATGTCCTGG TGGGCGCCAC CATGCCCAGC ATCCTGGTGG AGACCGCCTT TGTCAGCAAC
GTCGAGGAGG AAGCCCGCCT GAAGGACCCC GCCTACCAGG AAGCTACCGC CGAGGGGATC
CTGGAGGGTG TGCGCGCCTA CATCTCCAGC CTGAAGTAA
 
Protein sequence
MNRSGGMPLR EEASHMNRIL HILVCLLLTC LLPLHSQAAR KSQTAFTSQS SATRRPLAVL 
NDIKHWSTPD YTRVSIELDQ DVVWEAHELG KGGNGKQGRI FIDIKRSRLA MGIKNITIGD
GLLKGVRVAQ YRPEVVRVVL DTQNIKSYKV FPLSTPARLV IDVRGERPTE ISRMEQTLST
PPAPTAEPGR SEVAAVTKRT KSPRKVSHSK IRRIVLDPGH GGHDPGAVGA GGTQEKDVVL
AIGLKLRELL REELGLNVVM TRTSDVFIPL EERTAIANKV NADLFLSIHA NAAPNHAASG
IETYYLSLAK TEKAARLAAK ENGTTLEKVS VLQAILFDLM ANYKLNDSAH LANDVQKALH
KKIHGLHADV RNLGVKQGPF YVLVGATMPS ILVETAFVSN VEEEARLKDP AYQEATAEGI
LEGVRAYISS LK