| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0974 |
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| Symbol | |
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| ID | 4574259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 1016542 |
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| End bp | 1017981 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639755015 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_900660 |
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| Protein GI | 118579410 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTGG AGATGCGCCA ACAAATAAAG ATGACCCAGC AGCTGGTGAT GACACCCCAG
TTGCAGCAGG CCATCAAGCT GCTCCAGTTG ACCCGTATCG AACTTCAGGA TGTGGTGCGT
CAGGAGTTGG AGGAGAATCC GCTTCTCGAA GAAGCTGGCG AGCCGGAGGA GGGGGGGGAT
CCCGAGTCGG TTGACGCCCC GGAAAAGGAA GCGGAACCGC CTGCGGAGAC GGACGAATTC
CGCGAGGTGG AAGCGGGCGA TGACACCCTG CGCGACTGGG ACAGTTACCT GGACGGGTAT
AACTACAGTT CCGGTGAGCA GTACAGCGGC GATGACGATC GCCCATCCTT CGAGAGTCTG
TTGACCCGCA AGGGGACGCT GATTGATCAC CTGCTCTGGC AACTGCACAT GGGGCATTTC
CTCCCCGATC AGGTGCGCAT CGGCGAGGAG ATCATCGGCA ACATCGACGA GGGTGGATAT
CTGCGCTCCA CGATTGAGGA AATAGGGCAG GCCTGTGACG TCCCCGAAGA TGATGTCCTG
GCGGTGCTGA AACATATCCA GGAGTTCGAT CCCACCGGTG TCGGTGCTCG GGACCTGCGC
GAGTGTCTGC TGATCCAGGC CCGTTTTCTT GGCATGCAGG GCGGTGTCGT CGAACGAATC
CTGCAGAACC ATCTCAAGGC GCTGGAAACG CGCAACTATA AGTTGATTGC CCGCGATTTG
GGAGTCGACC TGCATCAGGT GCATATCGCC GCCAAGATAA TTGGCGGACT GGACCCCCGG
CCAGGCAGGC TCTTCGGTTC CGATGAAACG CACTACATCT CGCCCGACAT CTTCGTCTCC
AAGCTGGGGG ACGACTATGT GGTCATGCTC AATGAGGAAG GGCTGCCGAA CCTCAAGGTC
AGCCACTTCT ATTCTGAAGC GCGCAGCAGC GGCTCCGTGG ACTCCCGTGC CGAGGAGTAC
ATCGGGGAAA AGATCCGCTC TGCCCTTTGG CTGATCAAGA GCATTCAGCA GCGCCAGCGA
ACCATCTACA AGGTCGCCAA AAGTATCGTC CGCTTCCAGC GCGAATTCCT CGATTACGGC
ATCGAATACT TGCGTCCCCT GGTGCTGCGC GATGTGGCCG ATGATATCGG CATGCACGAA
TCCACCATCA GCCGCGTCAC CACGAACAAG TACATGCAGA CCCCTCAGGG ATTGTATGAA
CTCAAGTACT TCTTCAACAG CGGGCTTGCC ACCAGCGGTG GGGATTTCGT CGCCTCGGAG
AGTGTTAAGA CCCGTATTCG TGAGATAATA GAAAAGGAAG ATCCGCGCAA ACCGCTGTCA
GACCAGAAAA TTGCCGAGAT GCTCATGGCT GAGAAGGTCA CTATCGCCAG GAGGACCGTA
ACCAAGTACC GTGAGCTGCT CAGGCTCGGT TCCTCGTCGG AGCGCAAACG ACATTTCTGA
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| Protein sequence | MALEMRQQIK MTQQLVMTPQ LQQAIKLLQL TRIELQDVVR QELEENPLLE EAGEPEEGGD
PESVDAPEKE AEPPAETDEF REVEAGDDTL RDWDSYLDGY NYSSGEQYSG DDDRPSFESL
LTRKGTLIDH LLWQLHMGHF LPDQVRIGEE IIGNIDEGGY LRSTIEEIGQ ACDVPEDDVL
AVLKHIQEFD PTGVGARDLR ECLLIQARFL GMQGGVVERI LQNHLKALET RNYKLIARDL
GVDLHQVHIA AKIIGGLDPR PGRLFGSDET HYISPDIFVS KLGDDYVVML NEEGLPNLKV
SHFYSEARSS GSVDSRAEEY IGEKIRSALW LIKSIQQRQR TIYKVAKSIV RFQREFLDYG
IEYLRPLVLR DVADDIGMHE STISRVTTNK YMQTPQGLYE LKYFFNSGLA TSGGDFVASE
SVKTRIREII EKEDPRKPLS DQKIAEMLMA EKVTIARRTV TKYRELLRLG SSSERKRHF
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