Gene Ppro_0970 details

Gene Information

• Locus tag: Ppro_0970
• ID: 4574255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 1014061
• End bp: 1014576
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639755011
• Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
• Protein accession: YP_900656
• Protein GI: 118579406
• COG category: [R] General function prediction only
• COG ID: [COG1778] Low specificity phosphatase (HAD superfamily)
• TIGRFAM ID: [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA; [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000697
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGAGA AACTTAAAAA GATCAAACTA CTGCTCCTGG ATGTGGACGG CGTCATGACC 
GATGGCGGTA TCGTGTTTGA CGGCAACGGC CTGGAAACCA AGGTCTTCAA CGTCAAGGAC 
GGCCATGGTA TCAAGATGCT CCAGCGTTAC GGGATCCAAG TGGGAGTCAT TACCGGCAGA 
ACCTCGGCCG TGGTGGATAT CAGAACCCGT GAACTGGGCA TCGAACTGGT GTACCAGGGG 
GCTCTCAAGA AGATGGAAAG CTATGCCGAC GTGAAGCAGA AAACCGGTCT GGATGACTGT 
CAGGTCGCTT ACATGGGGGA CGACGTCATT GATGTTCCGG TTATGAGGCG GGTCGGTTTT 
GCGGCCGCTC CTCCTGATGC GCTGCCGGAG GTGCTGGCCG TTGCCGACTA TGTGTCATCC 
CGCTCCGGCG GAAGGGGTGC GGTGCGAGAG GTATGCGATC TTATCCTCAA GGGGCGTGGC 
TTCTGGCCTG AAATCGCCAC GCGCTATGAG TTGTGA 

 

Protein sequence

MQEKLKKIKL LLLDVDGVMT DGGIVFDGNG LETKVFNVKD GHGIKMLQRY GIQVGVITGR 
TSAVVDIRTR ELGIELVYQG ALKKMESYAD VKQKTGLDDC QVAYMGDDVI DVPVMRRVGF 
AAAPPDALPE VLAVADYVSS RSGGRGAVRE VCDLILKGRG FWPEIATRYE L