Gene Ppro_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0904 
Symbol 
ID4572087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp953144 
End bp955501 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content61% 
IMG OID639754946 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_900591 
Protein GI118579341 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACC ATCTCTGCCC ACCAGCCGGA GACGCAACCA GCGGCGCGCC CCTGACACCT 
CAGCGGAACC CAGCCCAGCC GAATGAGCCG CCACGCAACG GGTCGCACCG CCTGCCGGAA
AGGGAGGGCG GCGGACGGCA CTGCCCGCAA CCTGGACTGA AAGACATACT GGCTCGGTAT
CTGGACCTGT TCGATCTTGC CCCGGTGGGA TATGTAACCA TCAGCCAGGG GGGAACCGTG
GTGGAGGCCA ACCTGACCTT TGCCGCCATG GTCGGCGTCC AGCGGGACAG CCTGGCCGGC
GAACCGCTTG AGCGCTTCAT CACCCCGGAG GAGCATGAAG CATTCCTTGG CCGACGCACA
CGGCTCCACG AATCGCAGGA AAGGCAGAGC TGGGAGATGC GCATGCTGCG CGACGACGGC
TCCACGTTCT GGGCACAGTT GCAGGCGATC CCGGAGCGGG AGGGAGAATC ATGGATCACA
CTGGACGACA TCACCGCGCG TAAACGGGAC GAGTCTGATC TGGAGCTGAA GAGTTTCACC
CTGGACAACC TGGCCGAAGA GGTGCTCTGG CTGGCCGCCG ACGGCACGAT CTGGAACATA
AACCAAGTGG CCTGCGAAAA GCTGGGCTAC AACCGGGATG AGTTGCTGAA CCTCTCCGTC
ATGGACATCA ATCCGCAGAT GACAAAGGAA GGATGGCGCT CCTTCTGGGA GGAGCTGAAA
CAGACGGGCA ACCTAAAATT AGAGTCGTCC CACCGGACAC GGGACGGCCG CTGCTACCCC
ACCGAGGTCG TCGCCAACTA TTTCAACCGC AACGGCTTCG AATACTGCTA CTCCATCGTG
CGCGATATCA CCGCGCACAA AAACCTGGAA AAGGCTCTCC AGGACAGCGA AGAGCAGTTC
CGGACCCTCT GCAACTCGGC CCCCATCGGT ATTTTCAGCG CCGACCGCGA GGGGAACAGC
ATTCTCAGCA ACCCGCGCTG GGAAGAGATC GCCGGACTGT CGGCCGCGGA GTGCATCGGC
AAGGGGTGGA CCAGGGCCAT CCACCCCGAT GACCGCGAAG AACAGGCCAA AACCTGGCTG
GAGGCCATGA GCACCGGGCG GGTCTATTCC CACGAATACC GCCTGCTGAC CCCCCTGGGA
AAGACCATCT GGGTGCGGGC ATTGGCCAAC CCCATCAAGG ATCCGGACGG CACGGTGCTG
GGCTATGTCT GGACCGTGGA AGACATCACC GAGTTGCAGC AGTCGCGCCA GGAGATCCTG
AAAACCCAGA AGCTGGAGTC GCTGGGAGTG CTGGCGGGAG GCATCGCCCA CGACTTCAAC
AACATCCTGA CCGCAATTCT CGGCAACATT TCCCTGGCAC GCCTGCAACT CAATGACACG
GCGAAGGTCA CCAAACGCCT GGAGGAGGCT GAAACGGCAA CCACCCGCGC CAAGGACCTG
ACACGTCAGT TGATCACCTT TGCCCGGGGA GGCGAGCCGC TCAAAAAGAA CATCGACGTT
TCCAGCCTGC TCAGGGAGGC CACCGATTTT GCCCTGCACG GCTCCAACGT CAAATGCCGC
TTCGACCTGC CGGACGACAT CTGGATGGTG GAGGCGGACG AGGCGCAACT GAGCCAGGTC
ATCCACAACC TGGTGTTCAA CGCGATCCAG GCCATGCCGG GAGGGGGAAC CATCAGCATA
GGGGCGAGCA ACGTCGTCTC CCAAGAGGGG GGGAGGAAGT TCGTCAAAAT CTCCGTTACG
GACACCGGAA CCGGAATACC CGCCCACCAC ATGCAGCAGA TTTTCGACCC GTACTTCAGC
ACCAAGGAAA ACAGTATCGG CCTGGGCCTG GCCACCTGCC ACTCGATTCT CAAGAAACAT
GGCGGAAAGA TACGGGCAGC CTCCACCCTG GGAAGGGGAA GCACGTTTCT CGTCTCCCTG
CCCGCAGCGG ATCAGGCCGA CGAAGCGCCC TCCCCTAGTG CGGCCGAAGG ATCAAACACC
AGAAGGCATA TACTGGTAAT GGATGACGAA GAGATGATCA GGGAGTTGGC CGAGGCAATA
CTGACCGAGT TCGGATACTC GGTGGAATGC GTCGAAAGCG GCGCCCAGGC CATAGAACTC
TACGCCGCGA GGAAAGAAGA GAACAGACCC TTCTCAGCCG TTATCCTGGA CCTGACCATC
CCCGGCGGGA TCGGCGGCAG GGAGACCATG GAAAAGCTCC GCAGCCTGGA TCCCCATGTC
AGGGCGATCG TATCCAGCGG CTATTCCGAT GACCCGGTAG TGGCCAATTT CCGGGAGCAC
GGTTTCAGCG CGGTACTCAG CAAACCATAC CGGCCCCAGG AAATGGGCAG GGTGCTGCAG
GAGCTGTTCG CGCCTTAA
 
Protein sequence
MKNHLCPPAG DATSGAPLTP QRNPAQPNEP PRNGSHRLPE REGGGRHCPQ PGLKDILARY 
LDLFDLAPVG YVTISQGGTV VEANLTFAAM VGVQRDSLAG EPLERFITPE EHEAFLGRRT
RLHESQERQS WEMRMLRDDG STFWAQLQAI PEREGESWIT LDDITARKRD ESDLELKSFT
LDNLAEEVLW LAADGTIWNI NQVACEKLGY NRDELLNLSV MDINPQMTKE GWRSFWEELK
QTGNLKLESS HRTRDGRCYP TEVVANYFNR NGFEYCYSIV RDITAHKNLE KALQDSEEQF
RTLCNSAPIG IFSADREGNS ILSNPRWEEI AGLSAAECIG KGWTRAIHPD DREEQAKTWL
EAMSTGRVYS HEYRLLTPLG KTIWVRALAN PIKDPDGTVL GYVWTVEDIT ELQQSRQEIL
KTQKLESLGV LAGGIAHDFN NILTAILGNI SLARLQLNDT AKVTKRLEEA ETATTRAKDL
TRQLITFARG GEPLKKNIDV SSLLREATDF ALHGSNVKCR FDLPDDIWMV EADEAQLSQV
IHNLVFNAIQ AMPGGGTISI GASNVVSQEG GRKFVKISVT DTGTGIPAHH MQQIFDPYFS
TKENSIGLGL ATCHSILKKH GGKIRAASTL GRGSTFLVSL PAADQADEAP SPSAAEGSNT
RRHILVMDDE EMIRELAEAI LTEFGYSVEC VESGAQAIEL YAARKEENRP FSAVILDLTI
PGGIGGRETM EKLRSLDPHV RAIVSSGYSD DPVVANFREH GFSAVLSKPY RPQEMGRVLQ
ELFAP