| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0893 |
|---|
| Symbol | |
|---|
| ID | 4572076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 940702 |
|---|
| End bp | 942030 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639754935 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_900580 |
|---|
| Protein GI | 118579330 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.218351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC GTACAACACT TGCACTCGGA TTATGCATGG CTGCTTCGCT GACGGCAACC
AACCCCGCAA GCGCTGCTTT CACGGTGGGC GGTGAGAACG GCTGGCAGTT GAGCACGGAC
GGTATCGTGG ATGTCTTCGC AACCTATCAC ACCACTACAA GGATTAAGAG TGCCGATGCC
ACAAACCGTG GTATCGCGTG GCTGGACAAC AACACATTCG ACGAAACCAA CCAGCGATTC
GGTATTGGCG TCGGTCTGTT GCCGTCGGTC GTGGCCTTCA ACATCAAGGC GCCCACCACC
AATGGTATCG ATTCCACCGT ACGTGTCGGC ATCTACCCCA GTATTCAGAA CGGTAATCAG
GGTGGCCCTT CGAACAGGCG CTTTTCGGTA GGCGGCAACA TCGACTTCCG TGAAATGTTC
TACACCGCCA AGGGCAAGTA CGGCGAATTC CTGGCCGGTC GCGCCCTGAA CCTGTACCAG
GGCAAGAACA TCCTCACCGA CATGACGCTC TTGACCGCCG GTACCGTGGG GGCACGTGAC
AATACGGTTA CCTTGGGCCA CATCGGCTTC GGTTACCTGT ATACCGGCTT CGGGCCGCAG
ATGCGCTACA CCACCCCCGA GTTCCTTCCC GGGACCAAGT TCGCCATTGC CATAGGCGAG
CCCTACAACA TCAGCAGTGA AGGTGGTGAC AAGACCAATC TGCCCCGCGT GGAGGCCGAA
CTTTCCTACG CCCAGACCTA CAAGAGCGGC GCCAAAGCTC AAGCCTGGCT CTCCGGTATC
TACCAGAGGT CAACGCGCAA AACTTCGGAT AATGTAACTG CCGCTACTCT TAATTTAGAT
GGTACAACAA CCCCTGGATC TAGCGTTCCT AATCCTCGTG CTGGCGACCA TCTTGAGTCC
ATCGGCGGTG CCTATGGCAT CGGAGGGGGC TACAAAGGGG TTGAACTGCT CTTCTCCGGC
TACGGCGGCA GGGGATTGGG TATGGTCAGT GCCCAGGACG GTACGCTGGG GTCTACCGAC
AGCGCGGGAC AGGCCCGTTT GTTCTGGGGT TTCCTGGCTC AGGCTACCTA TCAGATCAAC
CCAACCTGGA AGGTTGGCAT CAACTATGGG CAGAGCCGGC TTGAAGAGAC CGACCAGGAT
ACCATCGATA GAAATAATGG TACCTATGCA GCGGCCAAGA AGCAGGAATC CGGCGTTTTC
AGTGTAACCT ACAACCTGAA CTCCTTCACC CAGTTCGTGG CTGAATACAT CCTTGCCCGC
CAGACCTGGC ATGACGGCGC ACATCAAACG TCCAACCAGT TCGCCTTCGG CACCATGTTC
TACTGGTAG
|
|---|
| Protein sequence | MKKRTTLALG LCMAASLTAT NPASAAFTVG GENGWQLSTD GIVDVFATYH TTTRIKSADA
TNRGIAWLDN NTFDETNQRF GIGVGLLPSV VAFNIKAPTT NGIDSTVRVG IYPSIQNGNQ
GGPSNRRFSV GGNIDFREMF YTAKGKYGEF LAGRALNLYQ GKNILTDMTL LTAGTVGARD
NTVTLGHIGF GYLYTGFGPQ MRYTTPEFLP GTKFAIAIGE PYNISSEGGD KTNLPRVEAE
LSYAQTYKSG AKAQAWLSGI YQRSTRKTSD NVTAATLNLD GTTTPGSSVP NPRAGDHLES
IGGAYGIGGG YKGVELLFSG YGGRGLGMVS AQDGTLGSTD SAGQARLFWG FLAQATYQIN
PTWKVGINYG QSRLEETDQD TIDRNNGTYA AAKKQESGVF SVTYNLNSFT QFVAEYILAR
QTWHDGAHQT SNQFAFGTMF YW
|
|---|
| |