Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0877 |
Symbol | |
ID | 4571772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 921363 |
End bp | 923168 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639754919 |
Product | CheA signal transduction histidine kinases |
Protein accession | YP_900564 |
Protein GI | 118579314 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00846405 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCCGA TTGATTGTGA AGACCAGGAA CTGCTGGAAG GCTTTCTCTC AGAGACGGCC GAATTGCTTG AGAAGCTTGA CGATGATCTG GTGGCTTTGG AGAAGTCGTC GGATGACGCC GATCTGCTTA ACCGCATCTT CCGCTCCATC CATACGGTCA AAGGCGCCTC AAGTTTTCTC GGCTTTGATC TGCTGGTCAA GGTGACCCAC AAGACCGAAG ATGTCCTGAA CCGGCTTCGC AAGGGGGAAC TGCAGGTAAC CCCCGAGATC ATGGATGTGA TTCTCGAGGC GACGGACCTG GTGAAGGTGC TGGTGAGCGA CATCAAGGCG GGAGAGATTC AGGAACGGGA GATTGATGGC ACCATTGCCA AGCTGTTGCC ACTTCTTGTG GAAACTGTTG TGGATGTCCA ACCCCAGGTC GAAGCGCCGC CTTCCGAGCC CGCTGAGAGC GCGGTTCCGT CAGTGGCCGA GGCTGCCGCT CCAGCTGAGC CGTCTCCTCC CCAGGACGCG CCCTCAGCGC CCCAGCAGAA ATTAGGCGGC GATGTGGTCA TGAAAAAGAG CCCGGCGCCG CCGAAGCCGG CCGAGGGGAG GGGAGATGAC CTCTCGGACA ACACCACTGT CCGGGTCGAT ATCAAGCGTC TCGATGACCT GATGAACCAG GTCGGTGAAC TGGTGCTGGA ACGTAACCGT ATGATCCAGA TCAACCAGAA CCTGCAGCAG GAGGATTTCA GCAAGGTCGA CTTCAACGAG GAATTCGGCA AGCTCACCAA ACGGATGAAC TTTGTCACCT CGGAACTGCA GATGCAGGTC CTGAAGATGC GCATGCTGCC GGTTGAAAAG GTCTTCAAGA AGTTTCCCCG CATCGTGCGC AGCATGGCCC GCGATCTGGG CAAAGAGGTT GACCTTCACA TTTTTGGCGA GGAGACCGAG CTGGATCGCT CCGTTGTTGA CGAAATTGGC GATCCGCTGA TCCACCTGAT CCGTAATGCC ATGGACCACG GACTGGAGAT GCCGGAGCAG CGTCTGGCCT CCGGCAAGCC GCGGGTGGGT AACCTGGTCC TGTCGGCCGT CCATGAGGGG AACCAGATCA TCATCAGCAT CAAGGATGAC GGCAACGGCA TCGACACGGA CAGGGTCGGT CGCAAGGCCC TGGAAAAGGG GCTGGTCACC GAGGAACAGC TGGCTGCCAT GAGCCAGCGG GAAATGTTCG ACCTGATCTT CCTGCCCGGC TTCTCCACCA AGGACAAGGC TAACGACCTG TCCGGCCGTG GTGTCGGCAT GGACGTGGTC AAGACGAACA TCAAGAAGCT GAATGGCCTG ATAGAAATCA AGAGCGAAAA GGGGCAGGGC TCGGAGTTCA TTCTGCGCCT TCCCCTGACC CTGGCCATCA TCCAGTCCCT GCTGGTTGAG GTGGAGGGGG AAGTCTACTC CATTCCGCTC TCGTCGGTTC TGGAGACTCT GCGGGTGGAT CAGCGCCAGT TTCACATCAT TGGCGGTCAG GAGGTCCTCA AGCTGCGGGA CATGGTCCTG CCGCTCGTAC GCCTGGAGAG GGTCTTCGGA GTGCAGAGAT GCGGCGAGCC GGACGATTTC TGCTATATCG TGGTGGTGGG AAGCGCCGAT AAGCGCATGG GGCTGGTGGT TACGCGTCTT GTGGGACAGC AGGAGGTTGC CATCAAGTCT CTCGGAAACT ACCTTGCCAA TATTCCCGGT ATTGCCGGAT CAACCATCCT TGGGGATGGG CGCGTGGCAC TGATTATCGA CCCTGTTGGT CTTGTCGAGA ATGGTGAGTG TGGCTCCGGT CGTTGA
|
Protein sequence | MSPIDCEDQE LLEGFLSETA ELLEKLDDDL VALEKSSDDA DLLNRIFRSI HTVKGASSFL GFDLLVKVTH KTEDVLNRLR KGELQVTPEI MDVILEATDL VKVLVSDIKA GEIQEREIDG TIAKLLPLLV ETVVDVQPQV EAPPSEPAES AVPSVAEAAA PAEPSPPQDA PSAPQQKLGG DVVMKKSPAP PKPAEGRGDD LSDNTTVRVD IKRLDDLMNQ VGELVLERNR MIQINQNLQQ EDFSKVDFNE EFGKLTKRMN FVTSELQMQV LKMRMLPVEK VFKKFPRIVR SMARDLGKEV DLHIFGEETE LDRSVVDEIG DPLIHLIRNA MDHGLEMPEQ RLASGKPRVG NLVLSAVHEG NQIIISIKDD GNGIDTDRVG RKALEKGLVT EEQLAAMSQR EMFDLIFLPG FSTKDKANDL SGRGVGMDVV KTNIKKLNGL IEIKSEKGQG SEFILRLPLT LAIIQSLLVE VEGEVYSIPL SSVLETLRVD QRQFHIIGGQ EVLKLRDMVL PLVRLERVFG VQRCGEPDDF CYIVVVGSAD KRMGLVVTRL VGQQEVAIKS LGNYLANIPG IAGSTILGDG RVALIIDPVG LVENGECGSG R
|
| |