| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0872 |
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| Symbol | |
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| ID | 4572108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 916660 |
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| End bp | 917436 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639754914 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_900559 |
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| Protein GI | 118579309 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0272824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATCA GCATCAGCGA AAAGCCATCG CTGCTCTCGG CCCTTCTTGC ACAGGCGCCC
CAGGAGCGGT CCAGCGTCGA GACAGACACC GCCTTTGCCG GAAAGTTGGA TGCAGCTCTT
GAGAATACCG TCGTCACCCC CACCAACGCC CAGGCTCTGG CGGAAACGCT CAACCTGCAG
ATGCTCCACT CAACCCTGGC CCTGGCCGGA GACAAACCGG CCGACAACAG CCCGCCCCCC
CAACCCTTCA GCCGCCAGTC ATCCCTTGTC CAGTCCCTGC TCGACTCCTA CCGCGCCACC
CAGGCCGAGG CAGACGCATC GTCGGATCAG TCATCGACCA AGCCGCAACC GCTGCCGGAC
TCAGGCACCC AATCCGCCAG CCTGCCGAGC AACAGCCAGT GGCTCGAGCC GATCATCGCC
AAGGCATCCC GGCATTACGG TGTCGACACG GGGCTAATCA AGGCGGTCAT CAAGGCCGAG
AGCGACTTCA ACCCACGGGC GGTCTCCAGC GCCGGCGCAC GGGGACTGAT GCAGCTCATG
CCCGCCACCG CCCGCGGCCT GGGGGTAAGC GACTCCTTCG ACCCGGAGCA GAACGTCATG
GCCGGGACGC GCTTTCTCCG CGACCTGCTC AACCGCTACA ACGGCGACCT GGAATCAACC
CTGGCAGCCT ACAACTGGGG GCCGGGCAAT GTGGACAGGC ATCCCGACCG CCTGCCGCGA
GAAACCCGCA CCTACCTGAC GCGCGTCAAA CAGCTCTACG CATCCTTCAC GGCCTGA
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| Protein sequence | MPISISEKPS LLSALLAQAP QERSSVETDT AFAGKLDAAL ENTVVTPTNA QALAETLNLQ
MLHSTLALAG DKPADNSPPP QPFSRQSSLV QSLLDSYRAT QAEADASSDQ SSTKPQPLPD
SGTQSASLPS NSQWLEPIIA KASRHYGVDT GLIKAVIKAE SDFNPRAVSS AGARGLMQLM
PATARGLGVS DSFDPEQNVM AGTRFLRDLL NRYNGDLEST LAAYNWGPGN VDRHPDRLPR
ETRTYLTRVK QLYASFTA
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