| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0765 |
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| Symbol | |
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| ID | 4571598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 810315 |
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| End bp | 812474 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639754808 |
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| Product | squalene-hopene cyclase |
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| Protein accession | YP_900453 |
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| Protein GI | 118579203 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000268109 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAG CAACCAGGTC GGTATTCAGT CTGCTGGATG GCGGCAAAAT CAGCGACTCG
GGCAGCAGGG GCGACAGCCG TCATGCAGGC TCCAGGCTGG ACAGCGTGAC AAAGAGCGCG
GCAGCCCTGC TCGCATCCCG CCAGAATCCC GATGGGCACT GGGTTTTCGA TCTGGAGGCG
GACGTTACCA TCCCGGCGGA ATATGTGATG ATGCGGTGCT TCATCGGCGA GCCCCTGGAT
TCCGATATGG CTTCACGGTT GTCCGCCTAC TTGCTGGAAC GGCAGTTGCC CGATGGAGGC
TGGCCGCTGT ATGCCGTTGA CGGCAATGCC AATATAAGCG CCACTGTCAA GGCCTATTTC
GCCCTCAAAC TGCTGGGGCA CGACAAGTAT GCGCCGCATA TGGTCAGCGC GCGCCGAATG
ATACTGGCGC AGGGGGGGGC GGAACGGAGT AATGTGTTCA CCAGGATCAC CCTGGCGCTC
TTCGGCCAGG TGCCGTGGCA TACGACTCCC GCCATGCCGA TCGAGATCAT GCTGCTGCCG
AAATGGTTCT TCTTTCATCT GAGCAAGGTC GCGTACTGGT CGAGAACGGT GATCGTGCCG
CTGCTGATCC TGTACAACAA ACAACCGGTC TGCCGGTTGG GCTACAGCGA AGGGATTGCC
GAACTGTTTT CGACGTCGCC GGACATGCTT GTCCATCTGG ATCACTTCCG CTACCGCGCC
TGGCGCAAGA ACGCCTTCAT CGTGCTGGAC CGCCTGCTCA AACGCACGAT GCATCTGGTT
CCCGGTCGCA TCAAACGACG TGCCCTGGAG GAGGCTGAAC GCTGGACGCG GGAACGGATG
AAGGGGGATG GCAGTATCGG CGCCATTTAT CCCGCCATGG CAAATGCCGT CATGGCGCTG
AAAACACTGG GGTGCGGTGA TAGTGATCCC GATTACCTGC GCGGTCTGCG GGCCATCGAC
AGACTGCTGA TCCACGGGAA GCCAGAGGCC GGGGCTCTGC CGGCCGACGG CGCGGGGACA
TTGTTCCCGG TTCTTGACGG AGCGTCCTCC GCCGCTGTCG ACCTGTATCC CGCATCCCTC
AGTGATACCG CGAAAAGCCA CGCATTCAGC TTCTGCCAGC CCTGCAACTC GCCTGTCTGG
GACACTGCCC TGAGCCTCAC GGCCCTCTCC GAAGCAGGTG GTGGCGGGTA CTCGCCGGAG
AGGGCCATGG AATGGCTCTT CAACCGGCAG ATCGCCACGC AGGGCGACTG GACCGAGAGA
TGCCCCGGCC TGGAGTGCGG CGGCTGGGCA TTCCAGTACG AGAATGCGCT CTATCCCGAT
GTGGACGATA CCGCCAAGGT ACTGATGAGT CTGTTCCGCG CCGGAGCGCT GGAGAGGGGG
GAGTACCCGG AGAAGATCGC AAAGGCGGTG CGGTGGGTGC TGGGCATGCA GGGGGCGGAC
GGCGGCTGGG GCGCTTTTGA TGTGGACAAC AATCACTTCT ACCTCAACGA CATCCCCTTT
GCCGACCATG GGGCTTTGCT CGACCCGAGC ACGGCCGACC TGACCGGCAG ATGCATAGAA
ATGCTGGGGA TGCTCGGCCA CGGCCCGGAC TACCCGCCCA TCACCCGGGG GATCGAGTTT
CTCAGGGAGG AACAGGAACC CTTCGGGGGG TGGTTCGGAC GCTGGGGGGT GAACTACATC
TACGGCACCT GGTCGGTCCT CTCGGGGCTG AGTCAGGCCG GGGAGGATAT GGGCCGGCCC
TATGTCAGGA AGGCGGTTGA ATGGCTGGTT TCATGCCAGA ACGACGATGG CGGGTGGGGT
GAGACCTGTG CCAGCTATGA CGACCCCTCC CTTGCGGGAA GCGGAGCCAG CACCGCATCC
CAGACCGCCT GGGCGCTCCT GGGGTTGATG GCGGCCGGCG AGGCGGATCA TGCCGCCGTC
AGGGCGGGCA TTGCCTACCT GGCGGACAGT TTCGCCGATG GCTGGGATGA GCGCCATTTC
ACCGGCACCG GTTTTCCGCG GGTATTTTAT CTGCGCTACC ATGGCTACAG CCTTTTCTTC
CCCGTCTGGG CCCTGGGGGT GTACGCACGA CACAGGGAAG GGGGAAAGAC TGTTCAGGAA
CAGGTTCGCG AACGCGGTGT CAACGGGGTC TTTGATTTCG TTATGGGCGG CTCTGCATGA
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| Protein sequence | MKKATRSVFS LLDGGKISDS GSRGDSRHAG SRLDSVTKSA AALLASRQNP DGHWVFDLEA
DVTIPAEYVM MRCFIGEPLD SDMASRLSAY LLERQLPDGG WPLYAVDGNA NISATVKAYF
ALKLLGHDKY APHMVSARRM ILAQGGAERS NVFTRITLAL FGQVPWHTTP AMPIEIMLLP
KWFFFHLSKV AYWSRTVIVP LLILYNKQPV CRLGYSEGIA ELFSTSPDML VHLDHFRYRA
WRKNAFIVLD RLLKRTMHLV PGRIKRRALE EAERWTRERM KGDGSIGAIY PAMANAVMAL
KTLGCGDSDP DYLRGLRAID RLLIHGKPEA GALPADGAGT LFPVLDGASS AAVDLYPASL
SDTAKSHAFS FCQPCNSPVW DTALSLTALS EAGGGGYSPE RAMEWLFNRQ IATQGDWTER
CPGLECGGWA FQYENALYPD VDDTAKVLMS LFRAGALERG EYPEKIAKAV RWVLGMQGAD
GGWGAFDVDN NHFYLNDIPF ADHGALLDPS TADLTGRCIE MLGMLGHGPD YPPITRGIEF
LREEQEPFGG WFGRWGVNYI YGTWSVLSGL SQAGEDMGRP YVRKAVEWLV SCQNDDGGWG
ETCASYDDPS LAGSGASTAS QTAWALLGLM AAGEADHAAV RAGIAYLADS FADGWDERHF
TGTGFPRVFY LRYHGYSLFF PVWALGVYAR HREGGKTVQE QVRERGVNGV FDFVMGGSA
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