| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0723 |
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| Symbol | |
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| ID | 4574966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 755418 |
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| End bp | 759134 |
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| Gene Length | 3717 bp |
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| Protein Length | 1238 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639754766 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_900412 |
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| Protein GI | 118579162 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.905647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGAAT CGGGGCGTTA TCCACCCTTG GCACCCTTCA TGCTTTCATT AAAATTCGAC
GTTATCCACG AACAGGTCAT CAAAGGGGAG CCGATCGAGA TGATGCCATC ACGAATCACG
GGGTTCATCA GCAACCTCAG TGTCGCAAAG AAACTTCTGC TGATCTACCT CCTGGATCTC
TCGGCGGTAA TCTTCATCAC AACCATTCTC ATCCATGAGA AGTACTTGGC CATAGACTTT
TCGCGCAAGG AAATCGCCGG CAACCACTAC ATCGCTGCTG CCAGGGAAAG CGTATTCGCT
TTAATCGAGA GCGCCGACGC AAGGAGAGAA GAGCACCGGC AGCCGGTCGC TGCGCGCCAG
GACGAGTTGA AGCGCGTGAC GGGAGCCCTT GTCGAAGCAG AAGAGCGCTA CGGCAGGGGG
CTGCACACCG GACAGTTCCA GCACGAACTG GTTCATGCTA TCCGCACGAT CATCACAGAA
GACGAGATCA ATGCATCCGG AGAGCCCAGG GCTCTCCACG CCGAAGCCAT CACCGCTGCC
ATGCAACTGA TCGCGAGAAT CGGCGACCAA TCAAACCTGA TCCTTGATCC GGATCTGGAC
AGCTATTACA CCATGTCCCT GGTCCTTCTG CGTTTTCCTG AGATGGTTTC ACTGCTGCTG
GACCATGGAG AACGTACCCA GGAATCCATG GCATCAGCGG GAGCAAGGAA TAAGCACTCC
CGGCTCGGAC TCCTGGTGAT GGAGGGAAAG CTGGCAGCGG CACAAAAGGC CATTGATTCC
GATTTCAACG CCGCATTCCG CAACGATCCC TCGGGAAGGC TGAAGGAACG CCTCGGTCAG
AGCCATGCCC GGCTGATCTC CTCGCTGCAG CGTATTGCCG CCCAGCCATA TGGGACAAAA
AGCGTAGAGA CAGCAACCAC CCGTTTCCGT ATACGACAGG CGCACCGGGA TGCCCTGCTC
AGCGTGCATG CCTGCTGGAA AGAGAGCTCC CAGGAACTCG ACCTGCTGCT GAACAACCGC
ATCGACTCGT ATTTCAGGCG CATGTGGCTG CACCTGGGTA CCGCATGTCT GCTGCTGGGG
CTGATCCTGC TGTCCGTTTT CTACATTGCC CGCAGAATCG TCGCCCCTAT TCGTGAGCTT
GCCACCGTCG CCGGGGCGGT GCAGATGACA AACGACTACA GCCTGCGTGC GAAGAAGGAG
GGAAATGACG AGATCGGCGA ACTGGTCAGC TGCTTCAACT CCATGCTGGA GCGGCTCAAC
AACGACCGCA TCACCCAGCA GGAACTCGTG GCAGCTGCCC GCGCCTCCGA TGCCCAGAGG
GCCCTGTTCG AGTCGATCCC CCTGCCGCTC ACGGTAACCT CCCTGAGCGG CCACAGCCTC
CGCCACGCCA ACGGGCCGGC ACTGGAGCTG TTCATGCCGG ATCAGACAGC CGCTGGCCTG
GAGTCGTGGT CCCCCTTTGA CGTCATAGCG GGAGAGAACC AGCGTGAAAC CTTTCTCTCG
CTCCTGGTTG AGGAAAAAAA CATCGATGAA TACGAGCTGC TCCTGCGGCT GCCCGGCGCT
CCCTGCTTTT GGTCCCAGGT TTCGGTACGC CCGGTGAGCT ACCAGGGTGA ACAGGCGCTC
CTGACGCTCT TCACCCCCAT CAACCTCCGC AAGCACCTGG AAGAGGGGGT GCGTAACGAG
AAGGCATTCT CCCAGGCGGC TCTGGATAGC CTGCCCGGCA TTTTTTTCAT GCTGGGCAGC
GATTTCAGGA TTCTCAGCAC CAACCGGAAT TTCGACCGTT TTCGGGAGAC CACCTCTCCC
GGCTCCCCCT TCTCTTCCAT CGAACTCCAT TTTCCGCCGG ACCAGAGGGA GAAGATTCGT
TCCATGGTCC AGGGAGGATT TCGGCGGGGC GCAGCCGAAG CAGAGGTATC ACTCCAGGGG
AGCTCATCCC GGGAGATCTA CCTCCTGACC TCACGGCTCT TCCTGCTGGG AGGCGAGGAT
TGTCTCATAA CCGTGGGGAT CGATATCAGT GCACGACGGA GGGCCGAGGC AACACTGGAG
CTGTGGGGGC GTGTCTTCGA GTGCACCTCG GAAAGCATCA TGATCACGGA CGCCGCGCAG
CGCATCGTCT CCGTCAACCA GGCATTCTGC GCCACCACGG GATACCGGGC GGAAGAGATC
ATCGGGCAGT CCTCCCTGGC GCTCAGGTCG GACGTGCATG ACGGCATCTA TTTCCGCCAG
CTCTGGCGGG GGATCAGAAA GCGCGGCTCA TGGCAGGGGG AATTCTGGTG TCGGCATAAA
AACGGCGAGG TTTCACCCCA GTGGATGGTG GTCAACACCG TCCATGACCG GCAGGGAACG
GTAACCAACT ACATCGCCCT GTTCACCGAT ATCAGCGCCC AGAAGTCCCA GGAACAGCGC
ATCCAGCACA TCGCCCATCA CGATGCCCTC ACCAACCTCC CCAATCGCCT GCTCTGCATG
GAGCGGCTGA TACTGGCCCT GCAGCAGGCG CATCGCAACG GACGGCATGT GGCGGTGATC
TTCATCGACC TGGACCATTT CAAGAACATC AACGATTCAC TCGGCCACCA TGTGGGTGAC
TGCGTCCTGG TCACGGCGGC CAACCGTCTC TCCATGGGTG TGCGTGACGG GGACACGGTC
AGCCGCCTGG GAGGGGACGA GTTCGTCATC ATTCTGGCCG ACATCGAGGA TTCCCATCAG
ATCGAGGAGA TCATGAAACA CCGGCTTCTG CCGCTGATGC GCCAGCCCTA CGACGCGGGG
GGATATGAGC TGCACTGTTC CTGCAGCATC GGCATCAGCA TCTTCCCGGA GGACGGTTTG
GACAAGGACA CCCTGCTGCG CAATGCCGAC ACTGCCATGT ACAGGGCAAA GGAGGTCGGG
AGGAACAACT ACCATTTTTA CACGGAAGAG CTGAACTCGC GGGCCATGCA GCGTCTCAGC
ATCGAGACCA GCCTGAGAAA GGGGATCGAG CGGAACGAGC TTCTGCTCCA CTACCAGCCA
AAACTGGATC TCCACACCGG CAAACCATAC GGCCTGGAGG CCCTTCTGCG CTGGCAGCAC
CCGGATCACG GCATGATTTC TCCCATGGAG TTCATTCCCA TAGCCGAGGA AACGGGACTG
ATCATCCCCA TCGGAAAGCA GGTCATCCGC AACGCCTGTC GCCAGCTTTC CCGCTGGAGT
TCGGTCGGGA TGTCCCACAT CTGCCTCTCC CTTAACGTTT CAGCTGTCCA GTTCCGTGAC
AGGCGCTTTG TCGAAGATCT GGTGCAACTG GTCAGGGAGG AGGGGGTATC CCCCCATCGG
ATCGAGCTAG AACTGACCGA AACCATGCTG ATGGAGGATG CGGTGCGGAC CATACGGGTC
ATGGAAACAC TCAAGGATGA GGGTTTTCTG TTCTCCATCG ATGATTTCGG TACCGGCTAC
TCGAGCCTGA ACTACCTGCA CCGTTTCCCC ATCGACTGCC TGAAAATAGA CAGGTCATTC
ATACGGGGAA TGCTGGAGCG ACCGGCCGAC CTGGCCATCA TCAAGGCCAT CATCGGCCTT
GGCCATACCC TTGACATGCA GGTCATCGCG GAGGGGGTGG AGAAGGAGGA TGAGTACCGT
GCCCTGCGCG CCGCCGGTTG CGACGGGATC CAGGGGTACT TTGTCGCAAG GCCACTCACG
CCGGAGCAAG TGCCTGAGTG GCTTCTGGCG CGGGAGATGG GCGGGCAAAC CGCCTGA
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| Protein sequence | MPESGRYPPL APFMLSLKFD VIHEQVIKGE PIEMMPSRIT GFISNLSVAK KLLLIYLLDL
SAVIFITTIL IHEKYLAIDF SRKEIAGNHY IAAARESVFA LIESADARRE EHRQPVAARQ
DELKRVTGAL VEAEERYGRG LHTGQFQHEL VHAIRTIITE DEINASGEPR ALHAEAITAA
MQLIARIGDQ SNLILDPDLD SYYTMSLVLL RFPEMVSLLL DHGERTQESM ASAGARNKHS
RLGLLVMEGK LAAAQKAIDS DFNAAFRNDP SGRLKERLGQ SHARLISSLQ RIAAQPYGTK
SVETATTRFR IRQAHRDALL SVHACWKESS QELDLLLNNR IDSYFRRMWL HLGTACLLLG
LILLSVFYIA RRIVAPIREL ATVAGAVQMT NDYSLRAKKE GNDEIGELVS CFNSMLERLN
NDRITQQELV AAARASDAQR ALFESIPLPL TVTSLSGHSL RHANGPALEL FMPDQTAAGL
ESWSPFDVIA GENQRETFLS LLVEEKNIDE YELLLRLPGA PCFWSQVSVR PVSYQGEQAL
LTLFTPINLR KHLEEGVRNE KAFSQAALDS LPGIFFMLGS DFRILSTNRN FDRFRETTSP
GSPFSSIELH FPPDQREKIR SMVQGGFRRG AAEAEVSLQG SSSREIYLLT SRLFLLGGED
CLITVGIDIS ARRRAEATLE LWGRVFECTS ESIMITDAAQ RIVSVNQAFC ATTGYRAEEI
IGQSSLALRS DVHDGIYFRQ LWRGIRKRGS WQGEFWCRHK NGEVSPQWMV VNTVHDRQGT
VTNYIALFTD ISAQKSQEQR IQHIAHHDAL TNLPNRLLCM ERLILALQQA HRNGRHVAVI
FIDLDHFKNI NDSLGHHVGD CVLVTAANRL SMGVRDGDTV SRLGGDEFVI ILADIEDSHQ
IEEIMKHRLL PLMRQPYDAG GYELHCSCSI GISIFPEDGL DKDTLLRNAD TAMYRAKEVG
RNNYHFYTEE LNSRAMQRLS IETSLRKGIE RNELLLHYQP KLDLHTGKPY GLEALLRWQH
PDHGMISPME FIPIAEETGL IIPIGKQVIR NACRQLSRWS SVGMSHICLS LNVSAVQFRD
RRFVEDLVQL VREEGVSPHR IELELTETML MEDAVRTIRV METLKDEGFL FSIDDFGTGY
SSLNYLHRFP IDCLKIDRSF IRGMLERPAD LAIIKAIIGL GHTLDMQVIA EGVEKEDEYR
ALRAAGCDGI QGYFVARPLT PEQVPEWLLA REMGGQTA
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