| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0706 |
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| Symbol | |
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| ID | 4571505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 735699 |
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| End bp | 736721 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639754749 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_900395 |
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| Protein GI | 118579145 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000591312 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATAAAA ACTGGCGCGA TCTTATCAGA CCTAAGCAAT TACAGTTTGA AAAAGAGTCG
CTTTCAGATA CATACGGTAA ATTTTTTGCA GAACCTTTTG AACGTGGTTT TGCTACAACT
TTGGGAAATT CTTTGCGGAG AATACTTCTT TCTTCACTTC AGGGTTCCGC AATTACTTCA
GTTCGTATAA AGGGTGTTTT GCACGAATTC AGTGCCATCC AAGGTGTTAC TGAAGATGTT
ACAGATATCA TTCTTAATCT TAAGGGCGTT CGTCTGAAGC TTCACTCTGT TGTTCAGGCT
ACTATACGTG TAGTCCATAC CGGTGAGGGT GTCGTAAAAG CTGGCGACTT TGTCGTCGGT
CATAACGTTG AGATAATGAA TCCCGAACAC CATATTGCAA CATGCGGCAA AGATGCTCAT
TTTGAAATGG ATATGACTGT CAAGATGGGT AAGGGTTATG TCTCGGCTGA TAAAAACCGC
GATGAAAAAG CCCCGGTTGG TACAATTCCC ATTGACTCGA TATTTTCTCC GATCAAGAAA
GTTAATTTTA CCATTTCCAA CGCTCGTGTT GGTCAAATGA CAGACTATGA CAAACTGACC
TTAGAGATTT GGACGGATGG AAGTGTCAAG CCTGATGATG CTCTGGCCTA TTCCGCAAAA
ATTATGAAAG AGCAGTTATC TATTTTCATT AATTTTGATG AAGAAGCTGA GCCTCAGGCT
CCTGAAGAGT CACAGGATGA AATAGATAAG ATAAACGAGA ATCTCTACCG TACGGTTGAG
GAACTTGAAC TTTCTGTACG ATCAGCCAAT TGCCTTAAGA ACGCCGGTAT CAAACTTATT
GGCGAACTCG TTTCTAAGAC TGAGGCTGAA ATGTTAAAAA CACAGAATTT CGGTCGTAAG
TCTCTGAACG AAATCAAAGA TATTTTGAGT GATATGGGAC TTACGTTTGG TATGAAGCTT
GACTCTTTTC CCGAGCCTGA TATGTTACGT CGCTTGCGTG GAGAGCAGAA CGAAGAAGAA
TAA
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| Protein sequence | MYKNWRDLIR PKQLQFEKES LSDTYGKFFA EPFERGFATT LGNSLRRILL SSLQGSAITS
VRIKGVLHEF SAIQGVTEDV TDIILNLKGV RLKLHSVVQA TIRVVHTGEG VVKAGDFVVG
HNVEIMNPEH HIATCGKDAH FEMDMTVKMG KGYVSADKNR DEKAPVGTIP IDSIFSPIKK
VNFTISNARV GQMTDYDKLT LEIWTDGSVK PDDALAYSAK IMKEQLSIFI NFDEEAEPQA
PEESQDEIDK INENLYRTVE ELELSVRSAN CLKNAGIKLI GELVSKTEAE MLKTQNFGRK
SLNEIKDILS DMGLTFGMKL DSFPEPDMLR RLRGEQNEEE
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