| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0705 |
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| Symbol | rpsD |
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| ID | 4571504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 735002 |
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| End bp | 735628 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639754748 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_900394 |
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| Protein GI | 118579144 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000946412 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCTCGGT ATACAGGTCC ATCCTGCCGT CTGTGCAGAA GAGAAAATAT GGAATTATTT
TTGAAGGGTG ACAGATGCTA TACGGATAAA TGTGCCATAA AGCGTCGTAA CTACCCTCCT
GGACAACATG GTCAGGGCCG TACTAAGAAC TCTGCTTACG GCATACAGTT GCGTGAAAAG
CAGAAAGTAC GCCGAATCTA TGGATTGATG GAGAATCAGT TCCGCGGTTA CTTCGCAGAA
GCTGATCGTA TGAAGGGTGT GACTGGCGAG AACCTTCTTT CGCTTCTTGA ACGTAGACTC
GATAATGTTG TTTATCGACT TGGTTTTGCC TCTTCGCGCT CTGAGTCACG CCAACTCGTG
CGCCACGGTC ATTTCACACT TAATGGCAAG AAAGTAGATA TCCCCTCGAT ACAAACAAGA
GTTGGTGACG TAATAGAGTT GCGCGAAAAG AGCAGGAAGA TTGTCTCGAT TAATGATGCT
CTTGACGCAG TGGCCCGTCG CGGAATACCG CAGTGGCTGG AACTTGATCG TGATGCCTTC
AAGGGAAATC TGAAAGCTTT GCCTGTACGT GAGGATGTGA CTACCCCCAT ACAGGAGCAA
CTGGTCGTCG AACTCTATTC AAAATAA
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| Protein sequence | MARYTGPSCR LCRRENMELF LKGDRCYTDK CAIKRRNYPP GQHGQGRTKN SAYGIQLREK
QKVRRIYGLM ENQFRGYFAE ADRMKGVTGE NLLSLLERRL DNVVYRLGFA SSRSESRQLV
RHGHFTLNGK KVDIPSIQTR VGDVIELREK SRKIVSINDA LDAVARRGIP QWLELDRDAF
KGNLKALPVR EDVTTPIQEQ LVVELYSK
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