Gene Ppro_0695 details

Gene Information

• Locus tag: Ppro_0695
• Symbol: rplF
• ID: 4571900
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 729240
• End bp: 729779
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 639754738
• Product: 50S ribosomal protein L6
• Protein accession: YP_900384
• Protein GI: 118579134
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.476782
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAGAA TAGGGAAACT TCCCATAGAT ATATCCAAGG ATGTAAAGCT TGCTTTTTCT 
GATTCTATAC TGTCGGTTCA AGGTCCATTA GGAAAATTAT CGCGTCGGAT CATGCCCTGT 
GTAAATTTAG AGATTACAGA CTCATGTATA ATTGTAATGC GAAATGACGA GTCAGGAACT 
GCAAGGTCAG CTCACGGCCT TACGCGTACA TTAGTCAGTA ATATGGTGAA CGGTGTTACC 
AAAGGTTTTC AGAAGAGCCT TGAAATTAAT GGTGTAGGAT ATCGTGCTGA AGTCAAGGGA 
AGTGAACTTG TTTTGAGTCT TGGCTACTCT CATCCTGTTG TTTTCACGAT ACCCGCTGGG 
GTTACTATAG AAGTTGATAA ACTGACCAAA GTGGTGGTTA AGGGTTTTGA TAAGGAACTT 
GTAGGGGAAA CCGCTGCAAA GATTCGGTCA TTCAGGCCGC CTGAACCCTA TAAAGGTAAG 
GGTGTTAAAT ATGCTGACGA GACTATCCTG AGAAAAGCCG GTAAGACAGG CAAGAAATAG 

 

Protein sequence

MSRIGKLPID ISKDVKLAFS DSILSVQGPL GKLSRRIMPC VNLEITDSCI IVMRNDESGT 
ARSAHGLTRT LVSNMVNGVT KGFQKSLEIN GVGYRAEVKG SELVLSLGYS HPVVFTIPAG 
VTIEVDKLTK VVVKGFDKEL VGETAAKIRS FRPPEPYKGK GVKYADETIL RKAGKTGKK