Gene Ppro_0686 details

Gene Information

• Locus tag: Ppro_0686
• Symbol: rpsC
• ID: 4571891
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 725748
• End bp: 726380
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 639754729
• Product: 30S ribosomal protein S3
• Protein accession: YP_900375
• Protein GI: 118579125
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0092] Ribosomal protein S3
• TIGRFAM ID: [TIGR01009] ribosomal protein S3, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.15256
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGGACAAA AAGTTAATCC GATAGGTTTC AGACTTGGAG TAATTAAATC ATGGGACTCC 
AAATGGTACG CTGAGGCTGA TTATGCAAAA CTTCTGCACG AGGATCTAAA GATTCGTGCA 
TTCCTTAAAA AACGTCTGTA TAGTTCCGGC ATTTCTAAGA TAGAAATTGA AAGAGCTGCG 
AATAAGACGA AGATAAATAT TTATACAGCT CGGCCCGGTC TGATCATCGG TAAAAAAGGT 
TCAGAGGTTG AAACGATTAA GAAAGAGCTT TCAAATCTCA CCTCCAAAGA AATTTTTATA 
AATATTATCG AAGTTCGTAA GCCAGAGCTT GATGCCCAAT TAGTTGCTGA AAATGTAGCA 
TTGCAGCTTG AAAGGCGAAT CGCATTTCGC AGGGCAATGA AGAAGAGTGT TACTTCTGCT 
TTGAAGTTTG GCGCTAAAGG CATACGTATT ACATGCTCTG GACGGCTTGG TGGAGCTGAA 
ATGTCGCGTA CCGAATGGTA CCGCGAAGGG CGTGTCCCAC TGCATACTCT TCGTGCTGAT 
ATTGATTATG GCTGTGCCGA GGCAAAAACG ACTTATGGTC TTATTGGCAT AAAAGTACTC 
ATATTTAAAG GCGAAGTTCT TCCAGGTCAT TAA 

 

Protein sequence

MGQKVNPIGF RLGVIKSWDS KWYAEADYAK LLHEDLKIRA FLKKRLYSSG ISKIEIERAA 
NKTKINIYTA RPGLIIGKKG SEVETIKKEL SNLTSKEIFI NIIEVRKPEL DAQLVAENVA 
LQLERRIAFR RAMKKSVTSA LKFGAKGIRI TCSGRLGGAE MSRTEWYREG RVPLHTLRAD 
IDYGCAEAKT TYGLIGIKVL IFKGEVLPGH