| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0674 |
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| Symbol | |
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| ID | 4571913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 713485 |
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| End bp | 717714 |
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| Gene Length | 4230 bp |
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| Protein Length | 1409 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639754717 |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_900363 |
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| Protein GI | 118579113 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0573556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGACT ACTTCAGCTT CTTTGATAAA CCCAAAGATC CGCTCCATTT TTCAGCAATT
CGGATTTCCG TTTCCTCGCC GGAAAAGATC CGTGAGCGGT CCCACGGCGA AGTAAAAAAG
CCAGAGACCA TAAATTACCG GACGTTCAAG CCGGAACGGG ATGGCCTGTT CTGCGCAAAA
ATATTTGGCC CGACCAAAGA CTACGAGTGC AATTGCGGCA AATACAAGCG CATGAAGCAC
CGCGGTATTA TCTGTGAAAA GTGCGGCGTC GAGGTTATTC CGTCCAAGGT CCGTCGCGAG
CGACTCGGAC ATATCGACCT TGCCACACCG GTCGCTCATA TCTGGTTCCT CAAGTCGCTG
CCGTCGCGCA TCGGCAACCT GCTTGACATC ACCCTCAAGG ATCTGGAAAA GGTCCTCTAC
TTTGAGGCCT TCGTTATCAG CGATCCCAAG AACAGTCCGC TCCAATTCTG CGAGGTGATG
TCTGAGGACA AATTTCTCAA GGCTCAGCAG GAATATGGCT ACGATGCCTT TTCAGGCGGC
ATGGGTGCCG AGGCCATCCG CGAGTGTCTG AAAGCCATCG ATCTGGACGA ACTCTCCGGT
CAGTTGCGCA CCGAGATGAT GGAGTCCACC AGCGAGGCCA AGCGCAAGAA AACTGCCAAG
CGCCTGAAGG TGCTGGAGGC ATTCAAGTCT TCGGGAAACA AACCAGAATG GATGATCCTG
GAATGTATCC CGGTCCTGCC GCCCGAGTTG CGCCCCCTGG TGCCCCTGGA CGGTGGTCGC
TTTGCAACAT CAGACCTCAA CGATCTGTAC CGCCGAGTTA TCAATCGCAA CAACCGTCTG
AAGCGATTGG TGGAGCTTCA GGCGCCTGAG GTTATCATCC GCAATGAAAA GCGCATGCTG
CAGGAGGCCG TGGATGCTCT GTTCGACAAC GGCCGCCGCG GCAGGGCGAT CGCGGGTCCC
AACAAGCGGC CGCTGAAATC CCTCTCCGAC ATGCTCAAGG GAAAATCCGG CCGTTTCCGT
CAGAACCTGC TGGGAAAGCG CGTCGATTAT TCCGGACGTT CAGTTATCGT TGTCGGCCCG
GAACTGAAGT TGCACCAGTG CGGTCTTCCC AAGAAAATGG CCCTGGAACT GTTCAAGCCT
TTCATCTACA ACAAGCTTGA GGAGCGCGGC TACGTCACCA CTATCAAGAG CGCTAAGAAG
ATGGTGGAGA AGGAGCGCCC CGAGGTGTGG GACGTGCTGG AGGAGGTTAT CAGGGAGCAC
CCGGTCATGC TCAACCGCGC TCCCACACTG CACCGCCTCG GCATCCAGGC CTTTGAGCCG
GTATTGATCG AGGGCAAGGC TATCCAGCTT CACCCGCTGG TCTGTACCGC ATTCAACGCC
GACTTCGACG GCGACCAGAT GGCGGTACAT CTCCCGCTTT CCGTGGAGAG CCAGGTGGAA
GCTCGCGTCC TGATGATGTC CACCAATAAT ATCCTCTCGC CGGCCCACGG CAAGCCGATC
ATCGTGCCTT CCCAGGACAT GGTTCTGGGA GCCTACTACA TGACTCGTGA CAGGCGCTTC
GAGCGCGTGA TAGACGAGAC GACCGGCAAG GAGAAGATCG ATGCGGAAAG CGGTCTGCCG
ATCTACCGCA AGGTAAAGGG CACCGGCAAG GTCTTTTCCG GTCCAGACGA GGTTCGCATC
GCCTTTGACG CCGGTGAGGT CGACATGCAG GCCACCGTCA AGGTGCGCAT GAAGAATCTG
GTCAGCGACG AAAAACCGCA GATGATCGAC ACCACTGTGG GGCGCGTTAT TCTCAAGGAG
ATACTGCCGG ATTCGGTACC GTTTAGCGCC GTAAACAAGG TCATGAACAA GAAGGAACTC
TCCAATCTCG TTGATACCTG TTACCGCATG GCGGACAACA AGGAGACGGT CATTCTTGCC
GACAAGCTGA AAGACATCGG CTTCCGTTAC GCCAACCTGG CAGGGATTTC CATCTGTCTC
GACGACATGG TCATCCCGGA GGGCAAAACC GAGATTCTCA CCAAGGCTGA GGACGAGGTT
AAGGAAATTC AGAACCAGTA TACCGAAGGT CTGATTACCG ATGGCGAACG CTACAACAAG
GTCATCGACA TCTGGGCTAA AGCTACCGAG GATATTGCCA AGGAGATGCT TGATAACCTT
TCCAAGGAAA AATTCTTCGT CGAAGGGGTA GGCGTTTCTG AGGAGGCCTC GTTCAACGCC
ATTCATATGA TGGCTGATTC AGGAGCGAGG GGTTCGCACC AGCAGATTCG TCAGCTGGCC
GGCATGCGCG GCCTTATGGC TAAGCCGTCG GGCGAGATTA TTGAAACGCC GATTACCGCC
AACTTCCGTG AAGGATTGAC GGTGCTGCAG TACTTCATCT CAACCCATGG TGCACGAAAG
GGTCTGGCTG ACACAGCCCT CAAAACGGCA AACTCCGGAT ACCTGACCCG TCGTCTGGTG
GACGTTGCTC AGGATGCCAT CATTGCTGAG GAAGATTGCG GCACGCTCGA TGGCCTGGTT
GTGTCGTCCC TCACCGAGGG GGGCGAGGTT ATCGAGCATA TCGGAGACCG CATTCTCGGC
CGCGTGGCTC TGGATGACAT CCTCGACCCG ATTACCGGAG ACGTACTTGT TGCTGCTAAC
GAGGATATCG ATGAGAACCT GGTCAAGCGC ATCGAGGATG CAGGACTTGA GAAGGTCAAG
ATCCGCTCCG TGCTTACCTG TCAGAGTCGG CGCGGCATCT GCTCCAAATG CTACGGTCGA
GACCTGGCGC GCGGTCACAG CGTCAATATG GGTGAGGCCG TGGGAGTCAT TGCGGCGCAG
TCCATCGGCG AACCGGGAAC GCAGCTTACC ATGCGTACAT TCCACATCGG CGGTACCGCG
TCCCGTCGCG CCGAGCAGAC TTCGCTGGAA TCTCGTACTG ACGGTATTCT CAAGTTTATC
AACCTGAACA CGGTTATTAA TGCCGAGGGA CATCATATCG TCATGAACCG CAACGGGGAA
ATCGCCGTTG TGGATGAAAC CGGCCGTGAA CGTGAAAAAT ATCTTGTCCT CTATGGAGCG
AAAATTAAGA TCGCTCCGGG GGGCGCGGTC ACCCAGGGGG GCATCCTGGC CGAATGGGAT
CCCTATACCA TGCCGATTCT TACCGAGTTC AGCGGTAAGG TGAAATTCGG TGACATAGTT
GAGGGTGTGA CCATGGAGGA GCAGCTCGAC GAAGTCACCG GCCTGTCCCG CAAGGTCATC
ATCGAATCGA AGGACAGCGA CAAGCGCCCG CGCATTGCCA TCAAAGGCAT GGGCGGCGAC
TCAGCCGATG CGGTCACCGG TACCATCGGG CGCTACTTCC TCCCCGTCGG CGCAAACATC
ACGGTGCAGG ACGATAGCGT CATTAGCGCC GGTGACATCA TCGCCAAGAT TCCCCGGGAA
ACGACCAAGA CCAAGGACAT TACCGGTGGT CTTCCGCGAG TGGCCGAGTT GTTCGAGGCT
CGCAAGCCGA AGGACTTTGC CGTTATTTCG GAAATTGACG GACGTGTTTC CTATGGTAAG
GATGCAAAGG GGAAGCGCAA AGTCATTGTC ACGCCTGAGA TGGGCGAACC GAAGGAATAC
CTGATTCCAA AGGGGAAGCA CATCAGCGTG CACGAGGGTG ACCATGTCCG TGCCGGGGAG
CCGTTGATGG ATGGCTCATC CAACCCCCAT GATATCCTGC GCGTATTGGG CGTCAAGGAA
CTTGCCAAGT ATCTGGTGGA TGAGGTTCAG GAGGTGTACC GCCTGCAGGG GGTTAAGATT
AACGACAAGC ATATCGAAGT AATCGTTCGC CAGATGCTGC GGCGTGTTCG CATCAAGGAT
GTGGGCGATA CATCACTGCT GGTTGACGAT CAGGTGGAGC GCTGGGTTTT CGAGACTGAG
AACCAGAAAG TAATGAATGA GGGCAAGCGT CCCGCCATAG CAGAACCGCT ACTACTCGGC
ATTACCAAGG CGTCTCTTTC CACAGAATCG TTTATTTCCG CAGCCTCGTT TCAGGAGACG
ACCAAGGTGC TTACGCAGGC GGCTATCGAG GGTAAAGTGG ACTATCTGAG GGGCTTGAAG
GAAAATGTCA TTATGGGGCG GTTGATCCCC GCTGGTACGG GGCTTTCAAG CTACCGGAAC
ATCCGCATGC TTACGGAAGC CAGTGAACCG GTTGCGCAGG CTGCTGAAAG TGAGGATGTT
CCCGATGTGA GTCAGCAGGA AGCAGCATAG
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| Protein sequence | MEDYFSFFDK PKDPLHFSAI RISVSSPEKI RERSHGEVKK PETINYRTFK PERDGLFCAK
IFGPTKDYEC NCGKYKRMKH RGIICEKCGV EVIPSKVRRE RLGHIDLATP VAHIWFLKSL
PSRIGNLLDI TLKDLEKVLY FEAFVISDPK NSPLQFCEVM SEDKFLKAQQ EYGYDAFSGG
MGAEAIRECL KAIDLDELSG QLRTEMMEST SEAKRKKTAK RLKVLEAFKS SGNKPEWMIL
ECIPVLPPEL RPLVPLDGGR FATSDLNDLY RRVINRNNRL KRLVELQAPE VIIRNEKRML
QEAVDALFDN GRRGRAIAGP NKRPLKSLSD MLKGKSGRFR QNLLGKRVDY SGRSVIVVGP
ELKLHQCGLP KKMALELFKP FIYNKLEERG YVTTIKSAKK MVEKERPEVW DVLEEVIREH
PVMLNRAPTL HRLGIQAFEP VLIEGKAIQL HPLVCTAFNA DFDGDQMAVH LPLSVESQVE
ARVLMMSTNN ILSPAHGKPI IVPSQDMVLG AYYMTRDRRF ERVIDETTGK EKIDAESGLP
IYRKVKGTGK VFSGPDEVRI AFDAGEVDMQ ATVKVRMKNL VSDEKPQMID TTVGRVILKE
ILPDSVPFSA VNKVMNKKEL SNLVDTCYRM ADNKETVILA DKLKDIGFRY ANLAGISICL
DDMVIPEGKT EILTKAEDEV KEIQNQYTEG LITDGERYNK VIDIWAKATE DIAKEMLDNL
SKEKFFVEGV GVSEEASFNA IHMMADSGAR GSHQQIRQLA GMRGLMAKPS GEIIETPITA
NFREGLTVLQ YFISTHGARK GLADTALKTA NSGYLTRRLV DVAQDAIIAE EDCGTLDGLV
VSSLTEGGEV IEHIGDRILG RVALDDILDP ITGDVLVAAN EDIDENLVKR IEDAGLEKVK
IRSVLTCQSR RGICSKCYGR DLARGHSVNM GEAVGVIAAQ SIGEPGTQLT MRTFHIGGTA
SRRAEQTSLE SRTDGILKFI NLNTVINAEG HHIVMNRNGE IAVVDETGRE REKYLVLYGA
KIKIAPGGAV TQGGILAEWD PYTMPILTEF SGKVKFGDIV EGVTMEEQLD EVTGLSRKVI
IESKDSDKRP RIAIKGMGGD SADAVTGTIG RYFLPVGANI TVQDDSVISA GDIIAKIPRE
TTKTKDITGG LPRVAELFEA RKPKDFAVIS EIDGRVSYGK DAKGKRKVIV TPEMGEPKEY
LIPKGKHISV HEGDHVRAGE PLMDGSSNPH DILRVLGVKE LAKYLVDEVQ EVYRLQGVKI
NDKHIEVIVR QMLRRVRIKD VGDTSLLVDD QVERWVFETE NQKVMNEGKR PAIAEPLLLG
ITKASLSTES FISAASFQET TKVLTQAAIE GKVDYLRGLK ENVIMGRLIP AGTGLSSYRN
IRMLTEASEP VAQAAESEDV PDVSQQEAA
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