Gene Ppro_0670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0670 
SymbolrplA 
ID4571909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp706910 
End bp707611 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content54% 
IMG OID639754713 
Product50S ribosomal protein L1 
Protein accessionYP_900359 
Protein GI118579109 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0081] Ribosomal protein L1 
TIGRFAM ID[TIGR01169] ribosomal protein L1, bacterial/chloroplast 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.759589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAGA CTGCAAAGAA ACTTGCTGCG GCATCCGAAA AGATCGACAG AACAAAGGTC 
TATCCCGTTG CGGCAGCCAT TGATGTTGTC AAGCAGGCGG CGTATGCCAA GTTTGACGAG
ACGGTCGACG TAGCGGTGCG TCTTGGGGTT GATCCTCGAC ACGCAGACCA GATGGTGCGC
GGAGCGGTCG TTCTTCCCAA CGGTCTGGGT AAGGATGTTC GCGTGCTGGT CTTCGCCAAG
GGTGAGAAGG AAAAAGAAGC TCTTGACGCT GGCGCTGATT ATGTGGGAGC CGAAGATCTT
GTTTCCAAGA TTCAGGAAGG GTGGTTTGAA TTCGATACTG CCATTGCTAC TCCCGACATG
ATGGGGGTTG TCGGCAAGAT CGGTAAACTG CTCGGACCAC GCGGACTGAT GCCGAACCCC
AAAGTGGGAA CCGTTACCTT TGAAGTGAGC AGGGCGGTGA AGGAGTCAAA AGCTGGTAAG
GTCGAGTTTC GCGTAGAGAA GGCCGGTATC GTGCATGCAC CGGTGGGAAA GGTTTCCTTC
GATGCCGACT CCCTGAAGGG CAATCTCCTG GCACTCGTGG AGGCGCTGGT CAAGGCCAAG
CCTTCCGCCG CTAAGGGAAT TTATATCAAG AAAATATCCA TGTCTTCAAC CATGGGCCCG
GGCATTAATC TTGATATTGC CGATGTAACA TCGCAGATCT GA
 
Protein sequence
MSKTAKKLAA ASEKIDRTKV YPVAAAIDVV KQAAYAKFDE TVDVAVRLGV DPRHADQMVR 
GAVVLPNGLG KDVRVLVFAK GEKEKEALDA GADYVGAEDL VSKIQEGWFE FDTAIATPDM
MGVVGKIGKL LGPRGLMPNP KVGTVTFEVS RAVKESKAGK VEFRVEKAGI VHAPVGKVSF
DADSLKGNLL ALVEALVKAK PSAAKGIYIK KISMSSTMGP GINLDIADVT SQI