| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0645 |
|---|
| Symbol | |
|---|
| ID | 4571822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 683174 |
|---|
| End bp | 683929 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639754683 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_900334 |
|---|
| Protein GI | 118579084 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0451004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC CAGACAACAG CATCGCGGAC AGTGTTTCCA TCGTCATGGT GGAACCGCAA
TCACCCGGCA ACATCGGCAT GGTCTGTCGC GCCATGAAGA ACATGGGGCT CTCCCGCCTG
CGCCTGGTGA AAGGGTGCGA CCGATTTCAC CCCGAATCAC TCAAGTTCGC GGTCTCGGCC
AAGGATCTGC TGGAGCGGGC GGAGTTGTAC GACGACCTGG CATCCGCCCT GGCAGACTGC
GCCCTGACCG TGGGAACCAC CCGCCGCCAC GGCAAGTACC GCCAGGAGAT ACTCTCCCCT
CCCCAGGTGG CCACCCTACT CAGGACGCGG GCACAGGGCG ACTGCAGGGG AGCTCTCGTC
TTCGGCCGCG AGGACAGCGG CCTGACCACC GATGAACTAT CCCTCTGCCG CTGGCACGCG
ACCATCCCCA CCTCCAGCGA GTATGGCTCC CTCAACCTGT CCCAGGCGGT CCTACTGTTC
TGCTATGAGT TGGGCAAGGC CAGTGACTCT CCCGGTGGGG GCAGAACGGA AATACCGGCC
ACCTCGGCCG AAATGGAGAC GCTCTTCAGC CAGATGGATA CCAGCTTGCA GCGCATCGGC
TTTCTCAACG AACAGAACCC CGGCCACATC ATGCGTTCCC TGCGCAGGAT TCTCTTTCGT
TCCGAACTGG ATAACCGCGA ACTGGCCATC CTGCGAGGCA TGTTCTCCCA GGTGGACTGG
GCCTGCTCCG GCTTCGACGG CAGGAAGCGC CTGTGA
|
|---|
| Protein sequence | MNEPDNSIAD SVSIVMVEPQ SPGNIGMVCR AMKNMGLSRL RLVKGCDRFH PESLKFAVSA
KDLLERAELY DDLASALADC ALTVGTTRRH GKYRQEILSP PQVATLLRTR AQGDCRGALV
FGREDSGLTT DELSLCRWHA TIPTSSEYGS LNLSQAVLLF CYELGKASDS PGGGRTEIPA
TSAEMETLFS QMDTSLQRIG FLNEQNPGHI MRSLRRILFR SELDNRELAI LRGMFSQVDW
ACSGFDGRKR L
|
|---|
| |