| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0627 |
|---|
| Symbol | |
|---|
| ID | 4571839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 664034 |
|---|
| End bp | 665287 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639754665 |
|---|
| Product | competence/damage-inducible protein CinA |
|---|
| Protein accession | YP_900316 |
|---|
| Protein GI | 118579066 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATTT CAACCTTGAG TATCGGAGAC GAACTGATCC GTGGCCGCAT TGTGGACGGC
AATGCCGCCA CCATTGCCGC TGCGCTGATC GGACAGGGCA TGCGCGTCCA GCGGCATCTC
ACCGTGGGGG ACAGTGAGCC CGATATCATG GATGCCCTGG CCGACCTGGG GCGCACCAGC
GATGCCATAA TAGTAACCGG CGGCCTCGGG CCAACGGTGG ACGACCTGAC CACCCATGCG
GTGGCCCGGG CCACCGGACG ACGCCTGGTG GTCAACGAGG AGGCCAGGGA GCACCTGCAC
AGGATGATGG CCCGCTTCGG CGTGCCGCCC GGCGTTCAGA TCGGCGAGAA GCAGGCCATG
ATTCCCACCA AGACAACCCT GATTCCCAAT CCCACCGGCA CCGCCTGCGG ATTCCACCTG
ATGCATAACG GCTGCTACCA GTTCTTCATG CCCGGCGTTC CCTCGGAGAT GACGGTCATG
CTGCACGAGT CGGTGATTCC CTTTCTGGCT GAGCGGGATA CGAAGAGACG TAGCATACGT
TCTCTGGACC TGAATGTGTT CGGTCTGGGA GAACCGCGAG TGGACGAACT ACTGGCCGGC
ATTGTCCTGC CCGGCTGCGG GCTGCAACTG GGTCTCTGCG TATCGTTCCC CATGATCAGG
GTCACGCTGC TGGCCGAGGC CGACAGCGTG CAGGGGGCCG AGGAGATTCT CTCCCGCGCC
GCCGATGCGG CACGGGAGAG GCTGGGTGAG CATGTTTTTT CCGAAGAGAA TCAGAATCTG
GCGGAGGCTG CGGGCACTCT GCTCCTCCGG CAGGGGATGA CCCTCGCCCT GGCCGAGTCG
TGCACCGGTG GCATGATCGC CCAGCAGATC ACCTCCGTGG CCGGCTGTTC GGGCTATTTC
CTGGAGGGGG CGGTGACCTA CGGCAATGTC GCCAAGAGTC GCCGCCTGGG CGTGGCGGCG
GAACTTATCG ACGGGAAGGG CGCCGTGAGC AGCGAGGTGG CCGAGGCCAT GGCCAAGGGG
ATCCGCGCTT CGGCCGGCAG CGACCTGGGG CTGGCGGTTA CCGGCATCGC CGGACCCGAT
GGCGGTACGG AGGAGAAGCC GGTGGGTACG GTCTACATCT CCCTGGCAAC GGCGGATGGC
TGTCGCACGG AGCGCTTCCT GTTCGGCCGC GGTCGCGACG ATATCCGTAT CCTGACCACC
TGGACCGCCC TGGACTGGAT CAGGCGCTAC CTGCTGCAGC GTTCGGCAGT CTGA
|
|---|
| Protein sequence | MRISTLSIGD ELIRGRIVDG NAATIAAALI GQGMRVQRHL TVGDSEPDIM DALADLGRTS
DAIIVTGGLG PTVDDLTTHA VARATGRRLV VNEEAREHLH RMMARFGVPP GVQIGEKQAM
IPTKTTLIPN PTGTACGFHL MHNGCYQFFM PGVPSEMTVM LHESVIPFLA ERDTKRRSIR
SLDLNVFGLG EPRVDELLAG IVLPGCGLQL GLCVSFPMIR VTLLAEADSV QGAEEILSRA
ADAARERLGE HVFSEENQNL AEAAGTLLLR QGMTLALAES CTGGMIAQQI TSVAGCSGYF
LEGAVTYGNV AKSRRLGVAA ELIDGKGAVS SEVAEAMAKG IRASAGSDLG LAVTGIAGPD
GGTEEKPVGT VYISLATADG CRTERFLFGR GRDDIRILTT WTALDWIRRY LLQRSAV
|
|---|
| |