| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0582 |
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| Symbol | |
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| ID | 4572347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 621482 |
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| End bp | 623035 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639754619 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_900271 |
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| Protein GI | 118579021 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAACA GGGATGAATT CTTCAGGGAG GTTACGGTCC GAATCTGCAG CAGCCTGGAG
ATCAAAACCG CCCTGCGCAG CGCCTTCACC TATCTGCGGG AGTTCTTTCC CCTGGACATG
CTCAGCCTCG GAATCTGTGA TGCCAGCCTG TCGGCCATCC GCAGGGTTGC CCATGTGACG
GCCGACTCCA CGGAGACCCA TGATGAGATC ATACCGGTTC CCGGGCAGCT CTGGGCATCG
CTGCAGCGCT GGGAGATGCG CTCGCCGGTG ATGGTGGACT CGGACCAGAG TGGTCTGGTG
CGGGCCCTGG CCCCCCACCT GAAGCTGGAC GAGAACTCCG GCATCCTGCT GCCGCTCTGG
AGTGGGGAGG GGATGCTGGG CTGGCTGACA CTGTACGCCT GGGGGGCGGG ACGCTTCGAT
GCCGGGCATG TGGCGTTGCT GGCAACGGTG GCCGACCCCT TCGTGATCGC CCTGGCCAAT
GCCTTGGCCC ACGAAAAGCT GCTCAGGTAC CGCGACAACC TGATCGACGA TAACCGTTTC
CTGAGCAAGG AACTCTTCAC CCAGGGGGGG GACGAGATCG TCGGCGCCAA CCTGGGGCTC
AGGCACGTGA TGGAGATGGT CCGCCAGGTG GCGCCGCTGA ACAACACCGT GCTGCTGCTG
GGGGAGACCG GCACCGGCAA GGAGCTGATC GCCAATGCCA TCCACTCCGC ATCACCCCGC
AAGGACGGTC CCCTGATCAA GGTCAACTGC GGCGCGATCC CGGAGCAACT CATCGACAGC
GAGCTGTTCG GCCATGAGAA GGGGGCCTTT ACCGGAGCGG TAACGGAGCG CCGTGGACGC
TTCGAGCGTG CCGACGGCGG CACCATCTTC CTGGACGAGA TCGGCGAGCT GCCGCTCCAG
GCCCAGGTGC GTCTCCTGCG GGTGCTCCAG AACCACGAGA TAGATCGGGT AGGGGGCAGC
AGGCCGATTC CGGTGGACAT CCGGGTGATC GCCGCCACCC ACCGCAATCT GGAGAGCATG
ATTGCCGAGA ACCGCTTTCG CGAGGACCTC TGGTTTCGCC TGAACGTCTT TCCGCTGTTC
ATACCGCCCC TTCGCCAGAG GCGCGAGGAC ATACCCGGCC TGACCCGTCA TTTCATCAGC
CAGAAATGTC GTGAGCTGGG CATGGCCGCC ATGCCGGACA TCGCGCCGGG CGCCCTGGTG
CGGCTGATGG AGTATGCCTG GCCGGGCAAC GTGCGCGAGC TCGAGAACCT GGTGGAGCGG
GAGCTGATTC TGCACCGGGG AGGGACTCTG CAGTTCGACG CACTCATGCC GGCCGCCCGG
CGGGGCAATG CTCCCGTTCA GCGGGAGGCG CCGGGCGTTG AGGAGGGGCT GGAGCTTGAC
CAGGCCATCT CCCGGCACCT GCGCAGGGTC CTTGATCTGA CCGGCGGACG GATACATGGC
CGTGGCGGGG CTGCGGAGCT GCTGGGTGTC AAGCCCAGCA CCCTCAGGTG GCGTCTTGAC
CGGCTCGGCA TTCCCCATGG TCGCGGCGCG GGCGGGGAGC GGGTGAAATC CTGA
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| Protein sequence | MVNRDEFFRE VTVRICSSLE IKTALRSAFT YLREFFPLDM LSLGICDASL SAIRRVAHVT
ADSTETHDEI IPVPGQLWAS LQRWEMRSPV MVDSDQSGLV RALAPHLKLD ENSGILLPLW
SGEGMLGWLT LYAWGAGRFD AGHVALLATV ADPFVIALAN ALAHEKLLRY RDNLIDDNRF
LSKELFTQGG DEIVGANLGL RHVMEMVRQV APLNNTVLLL GETGTGKELI ANAIHSASPR
KDGPLIKVNC GAIPEQLIDS ELFGHEKGAF TGAVTERRGR FERADGGTIF LDEIGELPLQ
AQVRLLRVLQ NHEIDRVGGS RPIPVDIRVI AATHRNLESM IAENRFREDL WFRLNVFPLF
IPPLRQRRED IPGLTRHFIS QKCRELGMAA MPDIAPGALV RLMEYAWPGN VRELENLVER
ELILHRGGTL QFDALMPAAR RGNAPVQREA PGVEEGLELD QAISRHLRRV LDLTGGRIHG
RGGAAELLGV KPSTLRWRLD RLGIPHGRGA GGERVKS
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