Gene Ppro_0553 details

Gene Information

• Locus tag: Ppro_0553
• ID: 4572562
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 589521
• End bp: 590195
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639754590
• Product: OmpA/MotB domain-containing protein
• Protein accession: YP_900242
• Protein GI: 118578992
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCTA AATGGGTTGT GAAGGTCATT GTTTGCGCTT CAACGGTGGG TCTCATGATG 
GGTGGTTGTG CTACAAACCC GGATGGCAGC TACGAGTACA AGAGGACCGC CATCGGTGGA 
GTGGGCGGTG CTGCAGTAGG CGCAGGTCTT GGTGCGCTGA TCGGCGGGGG GAAAGGAGCG 
GCGATCGGCG GGCTGTCCGG CGCGGTTGTT GGTGGTGGCA TTGGTAACTA TATGGACCGG 
CAGGCGGCTG CCTTAAAGAA GAATATGCCT GAAGCGGAAG TAGTCCGCGA TGGAGAGAAC 
GTGTATGTCG CCTTGCCATC AGGAATCCTG TTTGACACCG GGAAGGACGA GCTGAAAACG 
TCGGCGAAAG AATCGCTGGC CAAGGCCGCG GCTACGCTAA AGAGTTCCGA AACCAACATC 
ATCATCCAGG GCCACACCGA TTCGACCGGT TCCGATAAGA TTAACCAGCC ACTCAGTCAA 
AGGCGGGCCA ATCAGGTTCG CGACTTTCTT GCTGCCAACG GCGTTCCAAG CTCCAGGATG 
ACGGCAATCG GGTACGGCTC AAGCCGTCCC GCGGTTCCCA ACGATACAGA GGTAAATCGT 
GCATTGAACC GTCGTGTTCA GTTGGAAATC AGCCCCAATG AAAAGATCAA GGCCCAGACC 
AGCGGCAGTA ACTAG 

 

Protein sequence

MKSKWVVKVI VCASTVGLMM GGCATNPDGS YEYKRTAIGG VGGAAVGAGL GALIGGGKGA 
AIGGLSGAVV GGGIGNYMDR QAAALKKNMP EAEVVRDGEN VYVALPSGIL FDTGKDELKT 
SAKESLAKAA ATLKSSETNI IIQGHTDSTG SDKINQPLSQ RRANQVRDFL AANGVPSSRM 
TAIGYGSSRP AVPNDTEVNR ALNRRVQLEI SPNEKIKAQT SGSN