| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0531 |
|---|
| Symbol | |
|---|
| ID | 4572713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 567039 |
|---|
| End bp | 567749 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639754568 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_900220 |
|---|
| Protein GI | 118578970 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTCG GCATCAGAAC CGCGGCCTGC GCCGTCTCCT GCCTGGCCCT CACCGGCTGC
GCTTCCCACG ACCTGATGGT CAAGCGTCAG ACCGAGGCAG AGGCAAAGAT TGAGCACCTG
ATCGAGGCCG ATAAGAGAAA CAGCCAGCGC ATGAACGCCC TCTCCGGCCA GCTGCAGGAA
CTGGAACTGC GGCTGCGCGA CTCCAACGGC CGCATCAGCC AGTTGCAGGC CTCCATCGGC
GAGATGCAGG TCAAGGGCGA GTCCACAACG CCGAGCCACC CGGAGCCCGC CCCCACGATC
GAACTGGTCA ACAAAGAGCC AGCGTCAAAG GGAGGGGAGA GCGGCCCACC CGCCGAATAC
GTCAAGGCCT TCGGGCTGTA CAGCGCCAAC AGCTTCAGCG CTGCAATCCA GGCCTTCCAG
GCCTTCCTGG CCAATTCCCC CGGAAGCGAC TACACCCCCA ACGCCCTCTA CTGGATCGGC
GAATGCCACT ACACCCTTTC CGACTTCCCC CAAGCAGCGG CGGCATTCAA GAAGCTGGCG
GAGGGCTACC CAAAAAGCGC CAAGGCGCCC GACGCCCTGC TGAAACTGGG CTATACCCAG
ACAGCCATGA AGCAGCGCGA CAGGGCGACC AGAACATTCG AGAGCCTGAT CAGGCAGTAC
CCCAGCAGTC CGGCCGCCAG CAGGGCGCGT GAGCGCCTGA CCGCGCACTG A
|
|---|
| Protein sequence | MPFGIRTAAC AVSCLALTGC ASHDLMVKRQ TEAEAKIEHL IEADKRNSQR MNALSGQLQE
LELRLRDSNG RISQLQASIG EMQVKGESTT PSHPEPAPTI ELVNKEPASK GGESGPPAEY
VKAFGLYSAN SFSAAIQAFQ AFLANSPGSD YTPNALYWIG ECHYTLSDFP QAAAAFKKLA
EGYPKSAKAP DALLKLGYTQ TAMKQRDRAT RTFESLIRQY PSSPAASRAR ERLTAH
|
|---|
| |